Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F12
         (969 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.84 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.84 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 805 PXGSPPXHPPXXPPLXXPP 861
           P   PP  PP  PP+  PP
Sbjct: 577 PNAQPPPAPPPPPPMGPPP 595



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +1

Query: 781 PPPXXFKXPXGSPPXHPPXXPPLXXPPGXKXXTP 882
           PPP     P   PP  P    PL  P G +   P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = +1

Query: 760 PPXGGXXPPPXXFKXPXGSPPXHPPXXPPLXXPP 861
           PP G           P G PP  PP    L  PP
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPP 545


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -1

Query: 969 GGGXPXPGGEXPRGGXG-XXPPSPRGEKGXRG 877
           GGG   PG   P+G  G   P  P+G  G  G
Sbjct: 404 GGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDG 435


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
 Frame = -1

Query: 966 GGXPXPGGEXPRGGXGXX---PPSPRGEKGXRG 877
           G    PG +  +G  G     PP P+G  G RG
Sbjct: 84  GAPGLPGSKGVKGDPGLSMVGPPGPKGNPGLRG 116



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 963 GXPXPGGEXPRGGXGXXPPSPRGEKGXRG 877
           G P      P G  G  P  P+GEKG RG
Sbjct: 574 GLPVWKDRGPSGPSG--PLGPQGEKGDRG 600


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 769 GGXXPPPXXFKXPXGSPPXHPPXXPPLXXPPGXKXXT 879
           G   P    F    GSPP  PP  P    P G    T
Sbjct: 767 GMPSPSRSAFADGIGSPPPPPPPPPSSLSPGGVPRPT 803


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,526
Number of Sequences: 2352
Number of extensions: 6222
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105652443
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)