Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F11
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71261-4|CAA95804.1| 126|Caenorhabditis elegans Hypothetical pr... 66 4e-11
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 38 0.010
Z71258-14|CAN86574.1| 201|Caenorhabditis elegans Hypothetical p... 33 0.28
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 33 0.28
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 3.4
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 3.4
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 3.4
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 29 4.5
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 29 4.5
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 29 4.5
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 29 4.5
AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 28 7.9
>Z71261-4|CAA95804.1| 126|Caenorhabditis elegans Hypothetical
protein F21C3.5 protein.
Length = 126
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +2
Query: 119 VQKDIKKAVTQKQQLDSQXXXXXXXXXXXXXXXXDSEVYKLIGPVLVKQDLEEARQNVSK 298
++KD +K T +Q+++ + DS+VYKLIG VLV+QDLEEAR V K
Sbjct: 17 LEKDREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARSTVEK 76
Query: 299 RMEYISKEIKRTDDHICALENK 364
R+E+I E KR + I + K
Sbjct: 77 RLEFIDSETKRVEASISDISKK 98
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +2
Query: 260 KQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDLGKLKLK 427
++DL E R+ +++E +S+E+ I AL+ E LQE+L L +G LK++
Sbjct: 267 REDLSEIRKKNEQKIEGLSQELIEAYGEIDALKMNNEKLQEHLGDLEQRVGHLKIQ 322
>Z71258-14|CAN86574.1| 201|Caenorhabditis elegans Hypothetical
protein C01H6.8a protein.
Length = 201
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 260 KQDLEEARQNVSKRMEYISKEIKRT-DDHICALENKQEALQE 382
K+DL+E + KR+ I KE+K T DDH LE ++ L++
Sbjct: 66 KKDLDENELDYKKRIAEIEKELKATKDDHTRLLEKHEDYLRK 107
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 254 LVKQDLEEARQNVSKRMEYISK---EIKRTDDHICALENKQEALQENLNKLRNDLGKLK 421
L+++ E A+Q+ + + E I K + ++ DD + LEN EAL+ L + ND K K
Sbjct: 78 LLQRTDEAAKQSAAAQEEQIEKLAEQGRKKDDKLKELENNAEALKTQLQEQTNDAKKAK 136
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Frame = +2
Query: 260 KQDLEEARQNVSKRM-EYISKEIKRTDDHICALE-----NKQ--EALQENLNKLRNDLGK 415
+QDL+E R + K E S KR+D+ + ALE NKQ +A + + +LR+++ +
Sbjct: 339 EQDLDEKRNTLEKVFTEKTSARKKRSDERMSALEELEQQNKQKIDAKRAEIIRLRHEISE 398
Query: 416 LK 421
LK
Sbjct: 399 LK 400
>Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical
protein F33A8.10 protein.
Length = 263
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 254 LVKQDLEEARQNVSKRMEYISKE-IKRTDDHICALENKQEALQENLNKLRNDLGKLKLKA 430
++ +DLE+ R+NV + + +SKE ++ + + + + +E L K+ KL
Sbjct: 192 VIDKDLEDKRRNVDRAVSQMSKEAVEEFQRVVRIMHDPSQPEKEKLKKIEEIYSKLPDSI 251
Query: 431 *KMCELKVK 457
K ++K+K
Sbjct: 252 RKEFDVKLK 260
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Frame = +2
Query: 266 DLEEARQNVSKRMEYISKEIKRTDDHIC-------ALENKQEALQENLNKLRNDLGKL 418
DLE+ R+ + +E + K I+ D ++ A EN+ +LQ+ +N +GK+
Sbjct: 942 DLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEEKAAKENQIHSLQDEMNSQDETIGKI 999
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Frame = +2
Query: 266 DLEEARQNVSKRMEYISKEIKRTDDHIC-------ALENKQEALQENLNKLRNDLGKL 418
DLE+ R+ + +E + K I+ D ++ A EN+ +LQ+ +N +GK+
Sbjct: 942 DLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEEKAAKENQIHSLQDEMNSQDETIGKI 999
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Frame = +2
Query: 266 DLEEARQNVSKRMEYISKEIKRTDDHIC-------ALENKQEALQENLNKLRNDLGKL 418
DLE+ R+ + +E + K I+ D ++ A EN+ +LQ+ +N +GK+
Sbjct: 942 DLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEEKAAKENQIHSLQDEMNSQDETIGKI 999
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 260 KQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDLGKLKLK 427
+ +LE + VSKR+E ++ K+ D L L+ENL KL L+
Sbjct: 927 RDELEGILEEVSKRLEIEEQKAKKADSESRKLTEMVRHLEENLEDEERSRQKLLLE 982
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 260 KQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDLGKLKLK 427
+ +LE + VSKR+E ++ K+ D L L+ENL KL L+
Sbjct: 927 RDELEGILEEVSKRLEIEEQKAKKADSESRKLTEMVRHLEENLEDEERSRQKLLLE 982
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 260 KQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDLGKLKLK 427
+ +LE + VSKR+E ++ K+ D L L+ENL KL L+
Sbjct: 927 RDELEGILEEVSKRLEIEEQKAKKADSESRKLTEMVRHLEENLEDEERSRQKLLLE 982
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 251 VLVKQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEALQ 379
+ +KQDL ++ + SKE+ ++ +I LE K E L+
Sbjct: 704 IAIKQDLRAKLNDLEDKFAQKSKELAASNSNIARLERKNEKLK 746
>AF024502-1|AAK77624.1| 416|Caenorhabditis elegans Hypothetical
protein M151.7 protein.
Length = 416
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 251 VLVKQDLEEARQNVSKRMEYISKEIKRTDDHICALENKQEAL 376
+ +KQDL +++ + SKE+ ++ +I LE K E L
Sbjct: 245 IAIKQDLRVKLKDLEDKFAQKSKELSASNSNIARLERKNEKL 286
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 275 EARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDLGKLKLK 427
EA ++ K E I KEI++ + + E L+ +L+K++ D LKLK
Sbjct: 236 EASRSQDKTTE-IEKEIEKITAETAKVRVENEQLKASLSKIKEDTKILKLK 285
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 275 EARQNVSKRMEYISKEIKRTDDHICALENKQEALQENLNKLRNDLGKLKLK 427
EA ++ K E I KEI++ + + E L+ +L+K++ D LKLK
Sbjct: 236 EASRSQDKTTE-IEKEIEKITAETAKVRVENEQLKASLSKIKEDTKILKLK 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,106,966
Number of Sequences: 27780
Number of extensions: 297211
Number of successful extensions: 805
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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