Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F10
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.78 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   4.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +3

Query: 387 VNKYSTMKYLNVA---EKNDAAKNIALHLSKGTST 482
           +  Y  +K  N+    + ND  KN+ +H++K T T
Sbjct: 569 IGVYRNIKNFNIPSILQFNDGLKNLEIHVTKDTDT 603


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 681 NSLGSI*KQVHQTVIVGYRFARFC 610
           N  G +   +HQ +I  Y F R C
Sbjct: 226 NRRGELFYYMHQQIIARYNFERLC 249


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/69 (18%), Positives = 28/69 (40%)
 Frame = +3

Query: 210 IFRVIFSAAGIHIYRFNIKILSLCYENNITFIKNMLQCLEKLNSRLNRTLCFLVNKQIFV 389
           ++ + +S     I  F   +       +     N+L+ +E   S+LN  L    N  + +
Sbjct: 156 VYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNLLRIIEADFSKLNHLLSGTENLDLVL 215

Query: 390 NKYSTMKYL 416
             YS + ++
Sbjct: 216 PIYSQLVFM 224


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 665 ILPRELPKN*DDLRARSSKLSRPHNMD 745
           I PRE P+  D  R    K  RP N+D
Sbjct: 312 IAPRERPRATDHQRRNEPKRPRP-NID 337


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 388 TNICLFTKKQSVLFNLLFSFSRHCNI 311
           T + LFT    +LF +L  +S  C+I
Sbjct: 294 TALRLFTIDNKLLFGVLAYYSTTCDI 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,638
Number of Sequences: 336
Number of extensions: 4288
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)