Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F10
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    24   1.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   1.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.5  

>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +3

Query: 390 NKYSTMKYLNVAEKNDAAKNIAL 458
           NK+ T +YL+V E+ + A +++L
Sbjct: 25  NKFKTTRYLSVCERLNLALSLSL 47


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 562 ITISQSCPITLALN*YILLYFDSPSRLVDVPLD 464
           ITI+   P+  A+  +I   +DS  +L+++P D
Sbjct: 504 ITINADKPMKAAIRIFIGPKYDSHHKLIEIPED 536


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 562 ITISQSCPITLALN*YILLYFDSPSRLVDVPLD 464
           ITI+   P+  A+  +I   +DS  +L+++P D
Sbjct: 504 ITINADKPMKAAIRIFIGPKYDSHHKLIEIPED 536


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 598 LVEHTEPGKPVAHY 639
           L ++T PG P+AHY
Sbjct: 179 LDQYTNPGNPLAHY 192


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 531 WL*IDIFCCTLIVLH 487
           WL  D+ CCT  +L+
Sbjct: 112 WLTCDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 531 WL*IDIFCCTLIVLH 487
           WL  D+ CCT  +L+
Sbjct: 112 WLTCDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 531 WL*IDIFCCTLIVLH 487
           WL  D+ CCT  +L+
Sbjct: 112 WLTCDVLCCTASILN 126


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 645 TVIVGYRFARFCMF 604
           T ++G+R  R+C+F
Sbjct: 521 TGVIGHRMPRYCLF 534


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 645 TVIVGYRFARFCMF 604
           T ++G+R  R+C+F
Sbjct: 521 TGVIGHRMPRYCLF 534


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,255
Number of Sequences: 438
Number of extensions: 4659
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)