Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F08
         (947 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    27   0.63 
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    27   0.63 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   4.4  

>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 27.5 bits (58), Expect = 0.63
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 44  DRTYLEIVKLDQEFLRLRNVNMLFTGISK*SLANIKSY 157
           D TYLE+V LD++ LR +   +   GI+  ++    SY
Sbjct: 163 DSTYLEMVPLDEQDLRSKLEEVRAAGINSLAIVLAHSY 200


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 27.5 bits (58), Expect = 0.63
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 44  DRTYLEIVKLDQEFLRLRNVNMLFTGISK*SLANIKSY 157
           D TYLE+V LD++ LR +   +   GI+  ++    SY
Sbjct: 163 DSTYLEMVPLDEQDLRSKLEEVRAAGINSLAIVLAHSY 200


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 625 YKSHQIRKLSEDDSSRAYFEYSALLGDSLISEST*KLGWTHVVD 756
           Y S++I  L E  S+    E +  +G+ L+SE   KL W +V+D
Sbjct: 284 YLSNEIVVLEEKQSN---LESAGRMGE-LLSELQAKLAWRNVID 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,268
Number of Sequences: 2352
Number of extensions: 12518
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)