Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F07
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034953-1|AAH34953.1| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 46 2e-04
BC031062-1|AAH31062.1| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 46 2e-04
BC011556-1|AAH11556.1| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 46 2e-04
AL049557-7|CAB55686.2| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 46 2e-04
AK001506-1|BAA91727.1| 824|Homo sapiens protein ( Homo sapiens ... 46 2e-04
AF171063-1|AAF14544.1| 824|Homo sapiens DEAD box RNA helicase G... 46 2e-04
AF155803-1|AAK56799.1| 824|Homo sapiens DEAD-box corepressor DP... 46 2e-04
AF106019-1|AAD42744.1| 824|Homo sapiens DEAD-box protein protein. 46 2e-04
D17532-1|BAA04482.1| 472|Homo sapiens RCK protein. 34 0.76
BC065007-1|AAH65007.1| 483|Homo sapiens DDX6 protein protein. 34 0.76
BC039826-1|AAH39826.1| 187|Homo sapiens DDX6 protein protein. 34 0.76
D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation fac... 31 7.1
D13748-1|BAA02897.1| 406|Homo sapiens eukaryotic initiation fac... 31 7.1
BT019881-1|AAV38684.1| 406|Homo sapiens eukaryotic translation ... 31 7.1
BT019880-1|AAV38683.1| 406|Homo sapiens eukaryotic translation ... 31 7.1
BT009860-1|AAP88862.1| 407|Homo sapiens eukaryotic translation ... 31 7.1
BC130275-1|AAI30276.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 7.1
BC126287-1|AAI26288.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 7.1
BC073752-1|AAH73752.1| 406|Homo sapiens eukaryotic translation ... 31 7.1
BC048105-1|AAH48105.1| 408|Homo sapiens eukaryotic translation ... 31 7.1
BC016060-1|AAH16060.2| 767|Homo sapiens DDX27 protein protein. 31 7.1
BC015842-1|AAH15842.1| 407|Homo sapiens eukaryotic translation ... 31 7.1
BC013708-1|AAH13708.1| 407|Homo sapiens eukaryotic translation ... 31 7.1
BC012547-1|AAH12547.1| 408|Homo sapiens eukaryotic translation ... 31 7.1
BC011927-1|AAH11927.2| 767|Homo sapiens DDX27 protein protein. 31 7.1
BC009585-1|AAH09585.1| 406|Homo sapiens eukaryotic translation ... 31 7.1
BC009304-1|AAH09304.2| 769|Homo sapiens DDX27 protein protein. 31 7.1
AY044431-1|AAK95821.1| 796|Homo sapiens RNA helicase-like prote... 31 7.1
AL357560-1|CAH70236.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 7.1
AL049766-1|CAI22427.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 7.1
AK022979-1|BAB14343.1| 765|Homo sapiens protein ( Homo sapiens ... 31 7.1
AB209593-1|BAD92830.1| 375|Homo sapiens CD68 antigen variant pr... 31 7.1
AB209021-1|BAD92258.1| 67|Homo sapiens BM-010 variant protein. 31 7.1
X79538-1|CAA56074.1| 411|Homo sapiens translation initiation fa... 30 9.4
D21853-1|BAA04879.2| 412|Homo sapiens KIAA0111 protein. 30 9.4
CR533557-1|CAG38588.1| 600|Homo sapiens FLJ20542 protein. 30 9.4
CR456750-1|CAG33031.1| 411|Homo sapiens DDX48 protein. 30 9.4
BC020199-1|AAH20199.1| 389|Homo sapiens CPSF3L protein protein. 30 9.4
BC013904-1|AAH13904.2| 429|Homo sapiens CPSF3L protein protein. 30 9.4
BC011151-1|AAH11151.1| 411|Homo sapiens eukaryotic translation ... 30 9.4
BC008041-1|AAH08041.1| 389|Homo sapiens CPSF3L protein protein. 30 9.4
BC007978-1|AAH07978.1| 600|Homo sapiens cleavage and polyadenyl... 30 9.4
BC004386-1|AAH04386.1| 411|Homo sapiens eukaryotic translation ... 30 9.4
BC003662-1|AAH03662.1| 411|Homo sapiens eukaryotic translation ... 30 9.4
BC000675-1|AAH00675.2| 473|Homo sapiens CPSF3L protein protein. 30 9.4
AL139287-10|CAI23180.1| 379|Homo sapiens cleavage and polyadeny... 30 9.4
AL139287-9|CAI23178.1| 401|Homo sapiens cleavage and polyadenyl... 30 9.4
AL139287-8|CAI23179.1| 523|Homo sapiens cleavage and polyadenyl... 30 9.4
AL139287-7|CAI23176.1| 514|Homo sapiens cleavage and polyadenyl... 30 9.4
AL139287-6|CAI23177.1| 627|Homo sapiens cleavage and polyadenyl... 30 9.4
AL139287-5|CAI23174.1| 598|Homo sapiens cleavage and polyadenyl... 30 9.4
AK021939-1|BAB13943.1| 499|Homo sapiens protein ( Homo sapiens ... 30 9.4
>BC034953-1|AAH34953.1| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20 protein.
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>BC031062-1|AAH31062.1| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20 protein.
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>BC011556-1|AAH11556.1| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20 protein.
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>AL049557-7|CAB55686.2| 824|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20 protein.
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>AK001506-1|BAA91727.1| 824|Homo sapiens protein ( Homo sapiens
cDNA FLJ10644 fis, clone NT2RP2005763, weakly similar to
EUKARYOTIC INITIATION FACTOR 4A. ).
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>AF171063-1|AAF14544.1| 824|Homo sapiens DEAD box RNA helicase
Gemin3 protein.
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>AF155803-1|AAK56799.1| 824|Homo sapiens DEAD-box corepressor DP103
protein.
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>AF106019-1|AAD42744.1| 824|Homo sapiens DEAD-box protein protein.
Length = 824
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 672 TRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
TRT DV + E F S+LLS L GL ++GF++PSP+QL +
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>D17532-1|BAA04482.1| 472|Homo sapiens RCK protein.
Length = 472
Score = 33.9 bits (74), Expect = 0.76
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 657 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTR 833
DLR +T DV + F L L G+ G++KPSPIQ + A+ R + R
Sbjct: 71 DLR--IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILAR 128
Query: 834 SKV*TGK 854
+K TGK
Sbjct: 129 AKNGTGK 135
>BC065007-1|AAH65007.1| 483|Homo sapiens DDX6 protein protein.
Length = 483
Score = 33.9 bits (74), Expect = 0.76
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 657 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTR 833
DLR +T DV + F L L G+ G++KPSPIQ + A+ R + R
Sbjct: 82 DLR--IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILAR 139
Query: 834 SKV*TGK 854
+K TGK
Sbjct: 140 AKNGTGK 146
>BC039826-1|AAH39826.1| 187|Homo sapiens DDX6 protein protein.
Length = 187
Score = 33.9 bits (74), Expect = 0.76
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 657 DLRNSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTR 833
DLR +T DV + F L L G+ G++KPSPIQ + A+ R + R
Sbjct: 82 DLR--IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILAR 139
Query: 834 SKV*TGK 854
+K TGK
Sbjct: 140 AKNGTGK 146
>D30655-1|BAA06336.1| 407|Homo sapiens eukaryotic initiation factor
4AII protein.
Length = 407
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+IV+N F M L E L G+ + GF+KPS IQ +
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 64
>D13748-1|BAA02897.1| 406|Homo sapiens eukaryotic initiation factor
4AI protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+F M LSE L G+ + GF+KPS IQ +
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
>BT019881-1|AAV38684.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+F M LSE L G+ + GF+KPS IQ +
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
>BT019880-1|AAV38683.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+F M LSE L G+ + GF+KPS IQ +
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
>BT009860-1|AAP88862.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+IV+N F M L E L G+ + GF+KPS IQ +
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 64
>BC130275-1|AAI30276.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 245
>BC126287-1|AAI26288.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 245
>BC073752-1|AAH73752.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+F M LSE L G+ + GF+KPS IQ +
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
>BC048105-1|AAH48105.1| 408|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 408
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+IV+N F M L E L G+ + GF+KPS IQ +
Sbjct: 31 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 65
>BC016060-1|AAH16060.2| 767|Homo sapiens DDX27 protein protein.
Length = 767
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 184 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 216
>BC015842-1|AAH15842.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+IV+N F M L E L G+ + GF+KPS IQ +
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 64
>BC013708-1|AAH13708.1| 407|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 407
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+IV+N F M L E L G+ + GF+KPS IQ +
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 64
>BC012547-1|AAH12547.1| 408|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 2 protein.
Length = 408
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+IV+N F M L E L G+ + GF+KPS IQ +
Sbjct: 31 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 65
>BC011927-1|AAH11927.2| 767|Homo sapiens DDX27 protein protein.
Length = 767
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 184 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 216
>BC009585-1|AAH09585.1| 406|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 1 protein.
Length = 406
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+F M LSE L G+ + GF+KPS IQ +
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 63
>BC009304-1|AAH09304.2| 769|Homo sapiens DDX27 protein protein.
Length = 769
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 186 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 218
>AY044431-1|AAK95821.1| 796|Homo sapiens RNA helicase-like protein
protein.
Length = 796
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 245
>AL357560-1|CAH70236.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 245
>AL049766-1|CAI22427.1| 796|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 27 protein.
Length = 796
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 245
>AK022979-1|BAB14343.1| 765|Homo sapiens protein ( Homo sapiens
cDNA FLJ12917 fis, clone NT2RP2004568, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE C30D11.03. ).
Length = 765
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQ 788
Q EN++F M LS L + + GF++P+PIQ
Sbjct: 182 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 214
>AB209593-1|BAD92830.1| 375|Homo sapiens CD68 antigen variant
protein.
Length = 375
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+F M LSE L G+ + GF+KPS IQ +
Sbjct: 31 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAI 61
>AB209021-1|BAD92258.1| 67|Homo sapiens BM-010 variant protein.
Length = 67
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 690 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
+IV+N F M L E L G+ + GF+KPS IQ +
Sbjct: 21 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 55
>X79538-1|CAA56074.1| 411|Homo sapiens translation initiation
factor protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTRSKV*TGK 854
TF +M L E L G+ + GF+KPS IQ + + R + +S+ TGK
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 88
>D21853-1|BAA04879.2| 412|Homo sapiens KIAA0111 protein.
Length = 412
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTRSKV*TGK 854
TF +M L E L G+ + GF+KPS IQ + + R + +S+ TGK
Sbjct: 40 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 89
>CR533557-1|CAG38588.1| 600|Homo sapiens FLJ20542 protein.
Length = 600
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 282 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 325
>CR456750-1|CAG33031.1| 411|Homo sapiens DDX48 protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTRSKV*TGK 854
TF +M L E L G+ + GF+KPS IQ + + R + +S+ TGK
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 88
>BC020199-1|AAH20199.1| 389|Homo sapiens CPSF3L protein protein.
Length = 389
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 162 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 205
>BC013904-1|AAH13904.2| 429|Homo sapiens CPSF3L protein protein.
Length = 429
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 111 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 154
>BC011151-1|AAH11151.1| 411|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 3 protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTRSKV*TGK 854
TF +M L E L G+ + GF+KPS IQ + + R + +S+ TGK
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 88
>BC008041-1|AAH08041.1| 389|Homo sapiens CPSF3L protein protein.
Length = 389
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 162 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 205
>BC007978-1|AAH07978.1| 600|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 600
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 282 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 325
>BC004386-1|AAH04386.1| 411|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 3 protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTRSKV*TGK 854
TF +M L E L G+ + GF+KPS IQ + + R + +S+ TGK
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 88
>BC003662-1|AAH03662.1| 411|Homo sapiens eukaryotic translation
initiation factor 4A, isoform 3 protein.
Length = 411
Score = 30.3 bits (65), Expect = 9.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFR-FVTRSKV*TGK 854
TF +M L E L G+ + GF+KPS IQ + + R + +S+ TGK
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGK 88
>BC000675-1|AAH00675.2| 473|Homo sapiens CPSF3L protein protein.
Length = 473
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 155 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 198
>AL139287-10|CAI23180.1| 379|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 379
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 319 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 362
>AL139287-9|CAI23178.1| 401|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 401
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 174 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 217
>AL139287-8|CAI23179.1| 523|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 523
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 205 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 248
>AL139287-7|CAI23176.1| 514|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 514
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 196 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 239
>AL139287-6|CAI23177.1| 627|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 309 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 352
>AL139287-5|CAI23174.1| 598|Homo sapiens cleavage and
polyadenylation specific factor 3-like protein.
Length = 598
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 280 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 323
>AK021939-1|BAB13943.1| 499|Homo sapiens protein ( Homo sapiens
cDNA FLJ11877 fis, clone HEMBA1007087, weakly similar to
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KD
SUBUNIT. ).
Length = 499
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 238 FFQWTLWRIPRSYVQRFCFIFPHLCIFTRY*TVNKPPLLHTLNP 107
F WT +I +++VQR F F H+ F R N P++ P
Sbjct: 181 FIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATP 224
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,544,266
Number of Sequences: 237096
Number of extensions: 2421492
Number of successful extensions: 3009
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3009
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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