Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F07
         (858 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089635-1|AAL90373.1|  399|Drosophila melanogaster RE50350p pro...    33   0.50 
AE014297-735|AAF54221.1|  399|Drosophila melanogaster CG7483-PA ...    33   0.50 
AY051663-1|AAK93087.1|  459|Drosophila melanogaster LD21247p pro...    31   1.5  
AE014134-1792|AAN10728.1|  428|Drosophila melanogaster CG4916-PB...    31   1.5  
AE014134-1791|AAF52881.2|  459|Drosophila melanogaster CG4916-PA...    31   1.5  
M59926-1|AAA28603.1|  459|Drosophila melanogaster RNA helicase p...    30   3.5  

>AY089635-1|AAL90373.1|  399|Drosophila melanogaster RE50350p
           protein.
          Length = 399

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 678 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
           + DV+++   TF +M L E  L G+ + GF+KPS IQ   +
Sbjct: 19  SEDVEVIP--TFNAMNLKEELLRGIYAYGFEKPSAIQQRSI 57


>AE014297-735|AAF54221.1|  399|Drosophila melanogaster CG7483-PA
           protein.
          Length = 399

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 678 TRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
           + DV+++   TF +M L E  L G+ + GF+KPS IQ   +
Sbjct: 19  SEDVEVIP--TFNAMNLKEELLRGIYAYGFEKPSAIQQRSI 57


>AY051663-1|AAK93087.1|  459|Drosophila melanogaster LD21247p
           protein.
          Length = 459

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 666 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFRFV-TRSKV 842
           N  +T DV       F    L    L G+   G+++PSPIQ   +  A+  + V  R+K 
Sbjct: 45  NRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKN 104

Query: 843 *TGK 854
            TGK
Sbjct: 105 GTGK 108


>AE014134-1792|AAN10728.1|  428|Drosophila melanogaster CG4916-PB,
           isoform B protein.
          Length = 428

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 666 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFRFV-TRSKV 842
           N  +T DV       F    L    L G+   G+++PSPIQ   +  A+  + V  R+K 
Sbjct: 14  NRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKN 73

Query: 843 *TGK 854
            TGK
Sbjct: 74  GTGK 77


>AE014134-1791|AAF52881.2|  459|Drosophila melanogaster CG4916-PA,
           isoform A protein.
          Length = 459

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 666 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFRFV-TRSKV 842
           N  +T DV       F    L    L G+   G+++PSPIQ   +  A+  + V  R+K 
Sbjct: 45  NRFKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKN 104

Query: 843 *TGK 854
            TGK
Sbjct: 105 GTGK 108


>M59926-1|AAA28603.1|  459|Drosophila melanogaster RNA helicase
           protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 675 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVH*AMWFRFV-TRSKV*TG 851
           +T DV       F    L    L G+   G+++PSPIQ   +  A+  + V  R+K  TG
Sbjct: 48  KTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTG 107

Query: 852 K 854
           K
Sbjct: 108 K 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,415,874
Number of Sequences: 53049
Number of extensions: 688796
Number of successful extensions: 1224
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)