Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F07
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       26   0.39 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   2.1  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   2.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   2.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   8.3  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 0.39
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 708 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGV 800
           +F +  L    L  +  SG++KP+P+Q H +
Sbjct: 197 SFEAAGLRNIVLDNIKKSGYKKPTPVQKHAL 227


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 111 TRTKH*IDKIKQVT*LHSLRPQNLKDSL*CLR 16
           T+T++ ++K KQV        +N+K+ + CLR
Sbjct: 243 TQTENSLEKAKQVGAFMGCPTRNVKEMIRCLR 274


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 111 TRTKH*IDKIKQVT*LHSLRPQNLKDSL*CLR 16
           T+T++ ++K KQV        +N+K+ + CLR
Sbjct: 114 TQTENSLEKAKQVGAFMGCPTRNVKEMIRCLR 145


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 111 TRTKH*IDKIKQVT*LHSLRPQNLKDSL*CLR 16
           T+T++ ++K KQV        +N+K+ + CLR
Sbjct: 243 TQTENSLEKAKQVGAFMGCPTRNVKEMIRCLR 274


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 707 YVHFHASFRIYTSRIDIIGVPKTISNSTSW-CPLG 808
           + H  +SFR +     I+G  KT   +T +  P+G
Sbjct: 392 FFHPMSSFREFAVSTSILGDKKTAEENTDYFMPIG 426


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,280
Number of Sequences: 438
Number of extensions: 4201
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)