Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F05
         (903 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.61 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   4.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   4.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   7.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   10.0 

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
 Frame = +1

Query: 472 GHIQPRCSPKGSGC-SKTCLRS-SVQC------HHCHCFLPHTGIHC 588
           G + PRC    + C S  C  + ++ C      +HC+C L   G HC
Sbjct: 289 GFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNCKLGFMGRHC 335



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 547 HHCHCFLPHTGIHC 588
           H CHC   ++G +C
Sbjct: 168 HRCHCSDGYSGSYC 181


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 653 YNAASMYVAQQSKAAP 700
           YN+ +MY  QQ+ AAP
Sbjct: 5   YNSTNMYRHQQAVAAP 20


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 653 YNAASMYVAQQSKAAP 700
           YN+ +MY  QQ+ AAP
Sbjct: 5   YNSTNMYRHQQAVAAP 20


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 548 WHCTLLRKQVLLQ 510
           W CTLL+K  LL+
Sbjct: 93  WICTLLKKDKLLE 105


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 548 WHCTLLRKQVLLQ 510
           W CTLL+K  LL+
Sbjct: 111 WICTLLKKDKLLE 123


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 547 HHCHCFLPHTGIHCH 591
           H C C    TG +CH
Sbjct: 52  HRCQCQPGFTGKYCH 66


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 259 YHSQWQRLVG 230
           +H QW+R VG
Sbjct: 710 FHGQWERTVG 719


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,502
Number of Sequences: 336
Number of extensions: 2241
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)