Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F02
(1058 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 34 0.15
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.45
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.60
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.60
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.79
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.79
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.79
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.79
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.79
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.79
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 29 5.6
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 29 5.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 7.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 7.4
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 7.4
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 7.4
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 7.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.8
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 34.3 bits (75), Expect = 0.15
Identities = 29/112 (25%), Positives = 33/112 (29%)
Frame = +1
Query: 538 APRPXXGXADXXGXPAXXPSAXTXTAXGXXXXXAPXXRXPXSGXXXPQXPXATPPGRXND 717
AP P PA P P P + P P A P +
Sbjct: 49 APPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYP-QHAV 107
Query: 718 PAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHXXPP 873
PAP P P P +P AP PP PP PP + PP
Sbjct: 108 PAP-----APPPAPYPQHAVPAPAPYQQQPPPPP--PPPHYPPPPPHYPPPP 152
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.7 bits (71), Expect = 0.45
Identities = 18/64 (28%), Positives = 24/64 (37%)
Frame = +1
Query: 685 PXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHX 864
P PP R +P+P+ P P +P A PP PPP ++
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEI-S 530
Query: 865 XPPT 876
PPT
Sbjct: 531 GPPT 534
Score = 29.1 bits (62), Expect = 5.6
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = +1
Query: 592 PSAXTXTAXGXXXXXAPXXRXPXSGXXXPQXPXATPPGRXNDPAPNXXXVXPXXXPXPXX 771
P T A P + P S P TPP PAP P P P
Sbjct: 433 PKTPTRVAPPPPPSAPPTIKFPIS--TGPSYSSTTPP-TTPKPAPPPPSRIPNPSPSPQP 489
Query: 772 XIPXXAPXXXXGAPPXRWXPPPXSVPPXXHXXPP 873
+P PP P SVPP PP
Sbjct: 490 AEVSKSPPPPPPLPP---IATPSSVPPPPPPPPP 520
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.60
Identities = 31/119 (26%), Positives = 32/119 (26%), Gaps = 1/119 (0%)
Frame = +1
Query: 562 ADXXGXPAXXPSAXTXTAX-GXXXXXAPXXRXPXSGXXXPQXPXATPPGRXNDPAPNXXX 738
A G P P A G P P S P TP P P
Sbjct: 235 AHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 294
Query: 739 VXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHXXPPTXWGGKRXXXSXXP 915
+ P P P P P G PP PP PP PP G R P
Sbjct: 295 MWPPPPPPPPGRTP--GPPGMPGMPPP--PPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 676 PQXPXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPP 852
P P PP R P P +P P A P + PPP S PP
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.60
Identities = 31/119 (26%), Positives = 32/119 (26%), Gaps = 1/119 (0%)
Frame = +1
Query: 562 ADXXGXPAXXPSAXTXTAX-GXXXXXAPXXRXPXSGXXXPQXPXATPPGRXNDPAPNXXX 738
A G P P A G P P S P TP P P
Sbjct: 245 AHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG 304
Query: 739 VXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHXXPPTXWGGKRXXXSXXP 915
+ P P P P P G PP PP PP PP G R P
Sbjct: 305 MWPPPPPPPPGRTP--GPPGMPGMPPP--PPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Score = 32.3 bits (70), Expect = 0.60
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 676 PQXPXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPP 852
P P PP R P P +P P A P + PPP S PP
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.79
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +1
Query: 676 PQXPXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPX 855
P P PP P P P P P G PP PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP-PPPPGGCPPP 771
Query: 856 XHXXPPTXWGG 888
PP + G
Sbjct: 772 PPPPPPGGFKG 782
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.79
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +1
Query: 676 PQXPXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPX 855
P P PP P P P P P G PP PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP-PPPPGGCPPP 771
Query: 856 XHXXPPTXWGG 888
PP + G
Sbjct: 772 PPPPPPGGFKG 782
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.79
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +1
Query: 676 PQXPXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPX 855
P P PP P P P P P G PP PPP PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP-PPPPGGCPPP 354
Query: 856 XHXXPPTXWGG 888
PP + G
Sbjct: 355 PPPPPPGGFKG 365
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.79
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = +1
Query: 640 PXXRXPXSGXXXPQXPXAT---PPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGA 810
P P +G P P A PP R P P P P P
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPPRAGSPPPP 300
Query: 811 PPXRWXPPPXSVPPXXHXXPPTXWG 885
PP R PP S+PP P G
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAG 325
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.79
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = +1
Query: 640 PXXRXPXSGXXXPQXPXAT---PPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGA 810
P P +G P P A PP R P P P P P
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPPRAGSPPPP 321
Query: 811 PPXRWXPPPXSVPPXXHXXPPTXWG 885
PP R PP S+PP P G
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAG 346
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.79
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Frame = +1
Query: 640 PXXRXPXSGXXXPQXPXAT---PPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGA 810
P P +G P P A PP R P P P P P
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP--PPAGGSPPPPRAGSPPPP 306
Query: 811 PPXRWXPPPXSVPPXXHXXPPTXWG 885
PP R PP S+PP P G
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAG 331
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/87 (28%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = +1
Query: 580 PAXXPSAXTX-TAXGXXXXXAPXXRXPXSGXXXPQXPXATPPGRXNDPAPNXXXVXPXXX 756
P PS+ T A AP P + P PP + AP P
Sbjct: 575 PPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 634
Query: 757 PXPXXXIPXXAPXXXXGAPPXRWXPPP 837
P P P P GAPP PPP
Sbjct: 635 PPP----PMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/87 (28%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Frame = +1
Query: 580 PAXXPSAXTX-TAXGXXXXXAPXXRXPXSGXXXPQXPXATPPGRXNDPAPNXXXVXPXXX 756
P PS+ T A AP P + P PP + AP P
Sbjct: 401 PPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 460
Query: 757 PXPXXXIPXXAPXXXXGAPPXRWXPPP 837
P P P P GAPP PPP
Sbjct: 461 PPP----PMGLPAVGAGAPPPPPPPPP 483
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.8
Identities = 26/106 (24%), Positives = 32/106 (30%)
Frame = +1
Query: 505 GGXLPVXKTRRAPRPXXGXADXXGXPAXXPSAXTXTAXGXXXXXAPXXRXPXSGXXXPQX 684
G +P + + P P G D P P A G P R P +
Sbjct: 99 GYPVPGQEGHQVPAPQHG--DHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRT-----PP 151
Query: 685 PXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXR 822
P + PP R P+ P P P P P PP R
Sbjct: 152 PRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = +1
Query: 685 PXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHX 864
P A PP P P + P P P I AP GAPP PP + P
Sbjct: 198 PHAPPP-----PVPLTSNI-PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
Query: 865 XPP 873
PP
Sbjct: 252 PPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = +1
Query: 685 PXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHX 864
P A PP P P + P P P I AP GAPP PP + P
Sbjct: 184 PHAPPP-----PVPLTSNI-PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
Query: 865 XPP 873
PP
Sbjct: 238 PPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 3.2
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = +1
Query: 685 PXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHX 864
P A PP P P + P P P I AP GAPP PP + P
Sbjct: 184 PHAPPP-----PVPLTSNI-PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
Query: 865 XPP 873
PP
Sbjct: 238 PPP 240
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 4.2
Identities = 28/123 (22%), Positives = 35/123 (28%)
Frame = +1
Query: 517 PVXKTRRAPRPXXGXADXXGXPAXXPSAXTXTAXGXXXXXAPXXRXPXSGXXXPQXPXAT 696
PV + AP G G P+ P P G P P
Sbjct: 281 PVQQQGFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAP--PQGP 338
Query: 697 PPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHXXPPT 876
P G P + P P P + P + PPP S PP PP+
Sbjct: 339 PQG--GPPQGSFGAPPPQQFHAPSPQ-SFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPS 395
Query: 877 XWG 885
+G
Sbjct: 396 AFG 398
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/64 (28%), Positives = 24/64 (37%)
Frame = +1
Query: 685 PXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHX 864
P PP R +P+P+ P P +P A PP PPP ++
Sbjct: 465 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP----PPPPALEQEI-S 519
Query: 865 XPPT 876
PPT
Sbjct: 520 GPPT 523
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +1
Query: 811 PPXRWXPPPXSVPPXXHXXPPTXWGGKRXXXSXXP 915
PP + PP ++PP H WGG + P
Sbjct: 410 PPHQLVMPPPAMPPPQHMQAQRLWGGPQPQRMNQP 444
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +1
Query: 811 PPXRWXPPPXSVPPXXHXXPPTXWGGKRXXXSXXP 915
PP + PP ++PP H WGG + P
Sbjct: 410 PPHQLVMPPPAMPPPQHMQAQRLWGGPQPQRMNQP 444
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 7.4
Identities = 21/88 (23%), Positives = 23/88 (26%), Gaps = 3/88 (3%)
Frame = +1
Query: 664 GXXXPQXPXATPPGRXND-PAPNXXXVXPXXXPX--PXXXIPXXAPXXXXGAPPXRWXPP 834
G P+ PP P P P P P P PP + PP
Sbjct: 20 GGGGPKKDDQVPPAPDASMPTPQQQQQQPNLPPPQQPYEHPAQQHPPQHHSVPPNSFAPP 79
Query: 835 PXSVPPXXHXXPPTXWGGKRXXXSXXPG 918
P P PP W PG
Sbjct: 80 PGQHHPQHPGMPPMEWRPPGAEYQMPPG 107
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +1
Query: 745 PXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPXSVPPXXHXXPP 873
P P P P P P ++ PPP PP PP
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 7.4
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +1
Query: 664 GXXXPQXPXATPPGRXNDP-APNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPX 840
G P PPG P P + P P I A P PPP
Sbjct: 73 GQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 132
Query: 841 SVPPXXHXXPPT 876
SVPP PPT
Sbjct: 133 SVPP--SVPPPT 142
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 7.4
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +1
Query: 664 GXXXPQXPXATPPGRXNDP-APNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPX 840
G P PPG P P + P P I A P PPP
Sbjct: 96 GQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 155
Query: 841 SVPPXXHXXPPT 876
SVPP PPT
Sbjct: 156 SVPP--SVPPPT 165
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 7.4
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +1
Query: 664 GXXXPQXPXATPPGRXNDP-APNXXXVXPXXXPXPXXXIPXXAPXXXXGAPPXRWXPPPX 840
G P PPG P P + P P I A P PPP
Sbjct: 346 GQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPF 405
Query: 841 SVPPXXHXXPPT 876
SVPP PPT
Sbjct: 406 SVPP--SVPPPT 415
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 9.8
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +1
Query: 679 QXPXATPPGRXNDPAPNXXXVXPXXXPXPXXXIPXXA--PXXXXGAPPXRWXPPPXSVPP 852
Q P A+ P AP + P P P A P PP P P PP
Sbjct: 303 QIPEASEPTEAEADAPTTFILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPP 362
Query: 853 XXHXXPP 873
PP
Sbjct: 363 PPPPPPP 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,422,357
Number of Sequences: 27780
Number of extensions: 163600
Number of successful extensions: 534
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2824804260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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