Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_E24
         (910 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    26   1.4  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    26   1.4  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         26   1.8  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
 Frame = +1

Query: 454 NPHYHGYAELSSPHPSSPE----ASFAANGHDYPHNNNNPAL--KECAGCGGKIVER--F 609
           NP Y+GY   +    + PE     SF+  G  +  +N   ++  ++ A  GG    R  F
Sbjct: 244 NPSYNGYPTATLTKNALPEQEFSKSFSTFGFVWTPDNITVSINGEDLATIGGDFWTRGGF 303

Query: 610 LLHALDRYWHHG 645
             H L+  W HG
Sbjct: 304 DKHNLENPWRHG 315


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
 Frame = +1

Query: 454 NPHYHGYAELSSPHPSSPE----ASFAANGHDYPHNNNNPAL--KECAGCGGKIVER--F 609
           NP Y+GY   +    + PE     SF+  G  +  +N   ++  ++ A  GG    R  F
Sbjct: 244 NPSYNGYPTATLTKNALPEQEFSKSFSTFGFVWTPDNITVSINGEDLATIGGDFWTRGGF 303

Query: 610 LLHALDRYWHHG 645
             H L+  W HG
Sbjct: 304 DKHNLENPWRHG 315


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 532 HDYPHNNNNPALKECAGCGGKIVERFLLHALDRYWHH 642
           H    N++     +C+GCG KI      HA +   HH
Sbjct: 62  HGEKRNDSLKLFVDCSGCGNKIRVHIFEHAANH--HH 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,913
Number of Sequences: 2352
Number of extensions: 17630
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)