Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_E21
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81049-4|CAJ76935.1| 496|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical pr... 31 0.89
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.7
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 29 6.3
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 29 6.3
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 29 6.3
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z81049-4|CAJ76935.1| 496|Caenorhabditis elegans Hypothetical
protein C48D1.1b protein.
Length = 496
Score = 31.5 bits (68), Expect = 0.89
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 113 TKKCYKFLFFGSDSIALSSLRKVNELMKIRKTTDCLDLVTNNNSTTKLE-IEKYAQSENI 289
+K C + G SI+LS + KV E I TT CL+L+TN +S + +++ S N+
Sbjct: 382 SKACTNMIQAGIISISLSCMEKV-ESNDI--TTKCLELLTNLSSALNYDSLQELYTSSNV 438
Query: 290 KKL 298
K+
Sbjct: 439 DKI 441
>Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical
protein C48D1.1a protein.
Length = 631
Score = 31.5 bits (68), Expect = 0.89
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 113 TKKCYKFLFFGSDSIALSSLRKVNELMKIRKTTDCLDLVTNNNSTTKLE-IEKYAQSENI 289
+K C + G SI+LS + KV E I TT CL+L+TN +S + +++ S N+
Sbjct: 517 SKACTNMIQAGIISISLSCMEKV-ESNDI--TTKCLELLTNLSSALNYDSLQELYTSSNV 573
Query: 290 KKL 298
K+
Sbjct: 574 DKI 576
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 410 GXGKGPPPPXFXXXGGGGXXXPP 478
G GPPPP F GGGG P
Sbjct: 792 GGHGGPPPPHFDRRGGGGPPFRP 814
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 401 PXXGXGKGPPPPXFXXXGGGGXXXPPPXXXXXXXXGG 511
P G PPPP F G GG PPP GG
Sbjct: 774 PRGGMHHMPPPPSF-RGGRGGHGGPPPPHFDRRGGGG 809
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.7
Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 10/139 (7%)
Frame = +2
Query: 125 YKFLFFGSDSIALSSLRKVNELMKIRKTTDCL-DLVTNNNSTTKLEIEKYAQSENIKK-- 295
YKF+F + + ++ K+R+ T + V K + ++E ++K
Sbjct: 619 YKFVFEVPVAEIIDKMQDEEMAKKVRQATSAKQEAVAMQGEYWKTLCDFQKEAEELRKHI 678
Query: 296 ---LVPIGPPSR-DLQPAEYDMG---LL*PXAXXKXXXXQKXPXXGXGKGPPPPXFXXXG 454
+P+ PP++ +L G L P P G PPPP
Sbjct: 679 NDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI 738
Query: 455 GGGXXXPPPXXXXXXXXGG 511
GG PPP GG
Sbjct: 739 TGGPPPPPPPGGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.7
Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 10/139 (7%)
Frame = +2
Query: 125 YKFLFFGSDSIALSSLRKVNELMKIRKTTDCL-DLVTNNNSTTKLEIEKYAQSENIKK-- 295
YKF+F + + ++ K+R+ T + V K + ++E ++K
Sbjct: 619 YKFVFEVPVAEIIDKMQDEEMAKKVRQATSAKQEAVAMQGEYWKTLCDFQKEAEELRKHI 678
Query: 296 ---LVPIGPPSR-DLQPAEYDMG---LL*PXAXXKXXXXQKXPXXGXGKGPPPPXFXXXG 454
+P+ PP++ +L G L P P G PPPP
Sbjct: 679 NDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI 738
Query: 455 GGGXXXPPPXXXXXXXXGG 511
GG PPP GG
Sbjct: 739 TGGPPPPPPPGGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.7
Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 10/139 (7%)
Frame = +2
Query: 125 YKFLFFGSDSIALSSLRKVNELMKIRKTTDCL-DLVTNNNSTTKLEIEKYAQSENIKK-- 295
YKF+F + + ++ K+R+ T + V K + ++E ++K
Sbjct: 202 YKFVFEVPVAEIIDKMQDEEMAKKVRQATSAKQEAVAMQGEYWKTLCDFQKEAEELRKHI 261
Query: 296 ---LVPIGPPSR-DLQPAEYDMG---LL*PXAXXKXXXXQKXPXXGXGKGPPPPXFXXXG 454
+P+ PP++ +L G L P P G PPPP
Sbjct: 262 NDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI 321
Query: 455 GGGXXXPPPXXXXXXXXGG 511
GG PPP GG
Sbjct: 322 TGGPPPPPPPGGLPPISGG 340
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 285 TLKNWCRLGPLPGTYSQQNTIWD 353
TL CR GPLPG SQ IWD
Sbjct: 203 TLSALCR-GPLPGRISQLARIWD 224
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 285 TLKNWCRLGPLPGTYSQQNTIWD 353
TL CR GPLPG SQ IWD
Sbjct: 203 TLSALCR-GPLPGRISQLARIWD 224
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 285 TLKNWCRLGPLPGTYSQQNTIWD 353
TL CR GPLPG SQ IWD
Sbjct: 203 TLSALCR-GPLPGRISQLARIWD 224
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 419 KGPPPPXFXXXGGGGXXXPPPXXXXXXXXGGEKKXXGG 532
+GPPPP G PPP GG + GG
Sbjct: 500 QGPPPPMVAVGVVPGNVVPPPQMTRGSTHGGNQHNGGG 537
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 419 KGPPPPXFXXXGGGGXXXPPPXXXXXXXXGGEKKXXGG 532
+GPPPP G PPP GG + GG
Sbjct: 500 QGPPPPMVAVGVVPGNVVPPPQMTRGSTHGGNQHNGGG 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,997,864
Number of Sequences: 27780
Number of extensions: 313159
Number of successful extensions: 877
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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