Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_E20
         (864 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    25   1.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   1.2  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   2.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   2.7  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   6.3  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   6.3  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   6.3  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   6.3  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 328 AFNSILCMAFCRHKSTKL 275
           AF SI+C  FC+ ++  L
Sbjct: 72  AFKSIICKCFCKRRTNTL 89


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 328 AFNSILCMAFCRHKSTKL 275
           AF SI+C  FC+ ++  L
Sbjct: 520 AFKSIICKCFCKRRTNTL 537


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 701 HGNSASTRAATSYFPVISF-VLPWVPGWSEYGIDGTRAHCKF 579
           +   A+   A ++F V  F VLP +  W  Y  +G    C F
Sbjct: 167 NSKQAAVIIAFTWFWVTPFTVLPLLKVWGRYTTEGFLTTCSF 208


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -2

Query: 701 HGNSASTRAATSYFPVISF-VLPWVPGWSEYGIDGTRAHCKF 579
           +   A+   A ++F V  F VLP +  W  Y  +G    C F
Sbjct: 167 NSKQAAVIIAFTWFWVTPFTVLPLLKVWGRYTTEGFLTTCSF 208


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 294 LQKAIQSIELNAFTTITDDEAESHAIESE 380
           LQ  I+S +LN  ++  DD  E +A  S+
Sbjct: 62  LQYLIRSGQLNIISSDHDDSDEEYAANSQ 90


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 218 MTIYSLFLLIN*YRIIITSSIDNAL 144
           M I+S+FLL+    ++I    DN L
Sbjct: 1   MIIHSIFLLMVSITLVIAEESDNVL 25


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 218 MTIYSLFLLIN*YRIIITSSIDNAL 144
           M I+S+FLL+    ++I    DN L
Sbjct: 1   MIIHSIFLLMVSITLVIAEESDNVL 25


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 218 MTIYSLFLLIN*YRIIITSSIDNAL 144
           M I+S+FLL+    ++I    DN L
Sbjct: 1   MIIHSIFLLMVSITLVIAEESDNVL 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,150
Number of Sequences: 438
Number of extensions: 4743
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)