Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_E19
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    32   0.56 
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368...    30   2.3  
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913...    29   6.9  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 20/67 (29%), Positives = 23/67 (34%)
 Frame = +3

Query: 702  PXIXKXPXVFPXEXXPXCPXXXPXPCXXTGXPXPPFSPXGXXXGPFFXXPPRXXXFPXPG 881
            P + + P   P +  P  P   P P   T  P PP SP      P    PP     P P 
Sbjct: 1140 PPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPP----PPPLPSGPPPQ 1195

Query: 882  VXXPXXP 902
               P  P
Sbjct: 1196 PAPPPLP 1202


>05_07_0310 +
           29135875-29136052,29136206-29136617,29136723-29136867,
           29137944-29138102,29138183-29138242,29138349-29138546
          Length = 383

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = -1

Query: 856 RGGLXKXGPXXSPXGEKGGXGXPVNXQGXGXXXGXXGXFSXGKTXG 719
           R G  + GP     G +GG G P    G G   G  G +  G   G
Sbjct: 70  RDGAGRGGPGRGRGGGRGGRGGPRRDFGEGDANGFEGGYGGGGGFG 115


>10_08_0198 +
           15688142-15690427,15690524-15690607,15691232-15691336,
           15691420-15691528,15693037-15693188,15693278-15693583
          Length = 1013

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
 Frame = +3

Query: 795 PXPPFSPXGXXXGPFFXXPPRXXXFP---XPGVXXPXXP 902
           P PPF P G   GP     P     P    PGV  P  P
Sbjct: 516 PPPPFGPLGLPPGPMQPIGPNMSHSPGPLGPGVFIPPFP 554


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,259,402
Number of Sequences: 37544
Number of extensions: 176378
Number of successful extensions: 236
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)