Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_E10
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical pr... 33 0.27
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 1.1
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 1.1
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 1.1
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 1.1
U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fb... 31 1.4
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 30 2.5
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 30 2.5
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 3.3
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 29 3.3
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 29 3.3
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 3.3
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 3.3
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 28 7.7
>U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical
protein K11H12.8a protein.
Length = 342
Score = 93.9 bits (223), Expect = 1e-19
Identities = 54/148 (36%), Positives = 74/148 (50%)
Frame = +1
Query: 439 QVLFXESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSIIVT 618
Q + +S +WP YV+ERI TTY Y+AGSL LTA S VA R+ A++ L A G MS+ T
Sbjct: 96 QSILQKSAIWPSYVRERISTTYAYLAGSLALTAVSGVAASRSAAIMRLTAGGGMMSLFGT 155
Query: 619 LGLMIGSGMVVRGMEYTPWIWG*TISMDGAHWXLWELSLLQFASLVGPILMRAAWVHCWC 798
+ MI SGM+ R ++Y + ++ H + + GP+L RAAW
Sbjct: 156 MAAMIASGMLARSIDYESTV-AKHLAW-ALHCGVLGAVFAPLCFMAGPVLTRAAWYTAGI 213
Query: 799 SWWSEYNCSVCTIWRVLNMRAPLAMGLG 882
+ L M PLAMG G
Sbjct: 214 VGGLSATAITAPSEKFLMMSGPLAMGFG 241
>Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical
protein T10G3.8 protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 237 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 341
+ VP+N V +N + +PR RV TR P+ +L P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 708 CAIHANCLAPNPGCVLHSSYYHARTNHQTQCDNNGHPSISCYQI*KCGCSENSNCTTSS 532
C A C N C+ S Y+ A + +C + G C Q KC C N NC +SS
Sbjct: 251 CQNGATCDNTNGKCICKSGYHGALC--ENEC-SVGFFGSGCTQ--KCDCLNNQNCDSSS 304
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 708 CAIHANCLAPNPGCVLHSSYYHARTNHQTQCDNNGHPSISCYQI*KCGCSENSNCTTSS 532
C A C N C+ S Y+ A + +C + G C Q KC C N NC +SS
Sbjct: 251 CQNGATCDNTNGKCICKSGYHGALC--ENEC-SVGFFGSGCTQ--KCDCLNNQNCDSSS 304
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 708 CAIHANCLAPNPGCVLHSSYYHARTNHQTQCDNNGHPSISCYQI*KCGCSENSNCTTSS 532
C A C N C+ S Y+ A + +C + G C Q KC C N NC +SS
Sbjct: 251 CQNGATCDNTNGKCICKSGYHGALC--ENEC-SVGFFGSGCTQ--KCDCLNNQNCDSSS 304
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 708 CAIHANCLAPNPGCVLHSSYYHARTNHQTQCDNNGHPSISCYQI*KCGCSENSNCTTSS 532
C A C N C+ S Y+ A + +C + G C Q KC C N NC +SS
Sbjct: 251 CQNGATCDNTNGKCICKSGYHGALC--ENEC-SVGFFGSGCTQ--KCDCLNNQNCDSSS 304
>U21319-6|AAC46676.3| 535|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 8 protein.
Length = 535
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -3
Query: 866 SGARMFKTLQMVHTLQL--YSDHQLHQQCTQAARIRIGPTKEANWSN 732
+G+ MF QM LQ Y+D Q+HQ +Q+ R+ + P+ +SN
Sbjct: 120 NGSNMFSN-QMTQMLQAQAYNDLQMHQAHSQSIRVPVQPSATGIFSN 165
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 125 KKFKSC*NKRIINYVITNVYRSLGVQCNADSKIASTTKFCTEKLCGQKLCTRT--SNKG- 295
+ K C + IN V N+ ++L N + ++T FC CG CT S KG
Sbjct: 1254 ESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGY 1312
Query: 296 RYTLTTHTSGE 328
+H SGE
Sbjct: 1313 MCQCDSHFSGE 1323
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 125 KKFKSC*NKRIINYVITNVYRSLGVQCNADSKIASTTKFCTEKLCGQKLCTRT--SNKG- 295
+ K C + IN V N+ ++L N + ++T FC CG CT S KG
Sbjct: 1254 ESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGY 1312
Query: 296 RYTLTTHTSGE 328
+H SGE
Sbjct: 1313 MCQCDSHFSGE 1323
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 606 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 499
GHP IS C C+ N+N T S S H + D +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 606 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 499
GHP IS C C+ N+N T S S H + D +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 179 VYRSLGVQCNADSKIASTTKFCTEKLCGQKLCTRTSNKG 295
V R G CN+++ S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 179 VYRSLGVQCNADSKIASTTKFCTEKLCGQKLCTRTSNKG 295
V R G CN+++ S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 606 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 499
GHP IS C C+ N+N T S S H + D +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 606 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSIC 499
GHP IS C C+ N+N T S S H + D +C
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 829 THCNCTQTTNYTSSVPKLHASGLGQPRKQIGAMTAP 722
T+ C +T YT +PK G P+ + G+ P
Sbjct: 858 TNITCLETQEYTDCLPKCQKQCSGAPKCEAGSACTP 893
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,487,957
Number of Sequences: 27780
Number of extensions: 489493
Number of successful extensions: 1452
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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