Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_E10
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    25   0.70 
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    25   0.70 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   1.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   2.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.9  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
 Frame = +1

Query: 601 MSIIVTLGLMIGSGMVVRGMEYTPWIWG*TISM-----DGAHWXLWELSL 735
           +++++TLG+ I SG++  G+     I G +IS      D AHW L E SL
Sbjct: 403 LALVITLGIAIVSGLIT-GLIMRVLICG-SISEEQKFDDEAHWELEEESL 450


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 227 STTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGETHGTC 343
           S  K  T +LCG+ LC++ S K R+    H   +    C
Sbjct: 1   SAKKLFTCQLCGKVLCSKASLK-RHVADKHAERQEEYRC 38


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 828 HTAIVLRPPTTPAVYPSCTHQDWA--NQGSKLE 736
           HT      P+TP VY SC  Q  A  +QGS L+
Sbjct: 124 HTPTPNGHPSTPIVYASCKLQAAAVDHQGSVLD 156


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 683 AKQLAWMAHTGYYGSCHCSNLLP 751
           AK++   A+ GYY   +C NL P
Sbjct: 204 AKRMRPAANWGYYAYPYCYNLTP 226


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 414  CYYGSGVKPGTLQXISPLATIC 479
            CYYG   +P   + ++   T+C
Sbjct: 955  CYYGGDARPAYRRRLNVNETVC 976


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +1

Query: 226 QYHKILYRETMWSEIMHENLEQGSLHAHNPHFGRDSWHLLDQMHS 360
           Q+H    +E +W+ +    +  G      P F  + W L++Q  S
Sbjct: 799 QFHN---KELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWS 840


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +1

Query: 226 QYHKILYRETMWSEIMHENLEQGSLHAHNPHFGRDSWHLLDQMHS 360
           Q+H    +E +W+ +    +  G      P F  + W L++Q  S
Sbjct: 837 QFHN---KELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWS 878


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,914
Number of Sequences: 438
Number of extensions: 6480
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)