Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_E09
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0384 - 13361999-13362120,13362241-13362252,13362921-133629...    29   4.8  
05_03_0383 - 13352924-13353045,13353166-13353177,13353844-133539...    29   4.8  
07_03_1552 - 27648193-27648307,27648384-27648431,27649140-276492...    29   6.4  

>05_03_0384 -
           13361999-13362120,13362241-13362252,13362921-13362981,
           13363049-13363202,13364653-13364788,13365020-13365290,
           13365654-13365962
          Length = 354

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -1

Query: 772 LQSLKTMIKKLIRIIFYMEQISMFIDKSLAR 680
           L+SL+++I  +  II YM Q+ +F+D +L R
Sbjct: 146 LKSLRSLIGTMSGIIPYMNQLKVFVDVTLHR 176


>05_03_0383 -
           13352924-13353045,13353166-13353177,13353844-13353904,
           13353972-13354125,13355576-13355711,13355943-13356138
          Length = 226

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -1

Query: 772 LQSLKTMIKKLIRIIFYMEQISMFIDKSLAR 680
           L+SL+++I  +  II YM Q+ +F+D +L R
Sbjct: 18  LKSLRSLIGTMSGIIPYMNQLKVFVDVTLHR 48


>07_03_1552 -
           27648193-27648307,27648384-27648431,27649140-27649234,
           27649311-27649376,27649721-27649810,27650210-27650437,
           27650572-27650605,27651106-27651611
          Length = 393

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 555 WHFLIVTILFFFCLKAGFLICIIYSENNVQQ 463
           W FL+VTI F F        C +YS+ N+++
Sbjct: 170 WTFLLVTIYFAFATAISAHGCWVYSKKNLKK 200


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,117,242
Number of Sequences: 37544
Number of extensions: 390985
Number of successful extensions: 785
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)