Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_E06
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    32   0.73 
12_02_0082 - 13372997-13373863,13373928-13374386                       30   2.9  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.9  
01_01_1008 - 7987936-7988628,7988923-7989102                           30   2.9  
01_01_0601 - 4476261-4476728                                           29   3.9  
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534...    29   5.1  
01_01_1201 + 9678893-9679311,9679415-9679721                           29   6.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  

>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = -2

Query: 778 QPRX-EANRPTPELRYVQREL*ESATLPEGRKAD-KYPVSGRGRNRRAHEGASRGKRLVS 605
           QPR  +AN   PE    QREL   AT P     D +  ++GR + RR  + A+R +R VS
Sbjct: 19  QPRIGDANGEDPE----QRELPRQATPPPRGTGDLRDQINGRRKARRTRDDANRSRRHVS 74


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 636 SCALLFRPLPLTGYLSAFLPS 698
           SCALLF P+PL G     LPS
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS 184


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 628 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 509
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 716 RKRHASRREKGGQVSGXRQGSEQESARGSFQGETPG 609
           R R   RR  GG+V+G      +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>01_01_0601 - 4476261-4476728
          Length = 155

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 20/71 (28%), Positives = 25/71 (35%)
 Frame = -1

Query: 833 DDSXRIRXSGRAXRGFXHTAQVXGEPTYTRTEIRTA*AMRKRHASRREKGGQVSGXRQGS 654
           D   R +  GR  R    T      PT  R   R       RH  RR    + +    GS
Sbjct: 16  DGPDRPKPIGRLRRAVASTGTAGAGPTDHRGRRRAVTGDGGRHRERRRAAREAARGNGGS 75

Query: 653 EQESARGSFQG 621
           E E   G+ +G
Sbjct: 76  EGEGGGGAHRG 86


>09_04_0741 -
           19852339-19852497,19853185-19853246,19853352-19853415,
           19853561-19853614,19853744-19853890,19854460-19854564,
           19854651-19854794,19854987-19855093,19855613-19855712,
           19855804-19855833,19856492-19856608,19856705-19856828,
           19857143-19857189,19857272-19857400,19857777-19857852,
           19858446-19858543,19858630-19858671,19858811-19859044
          Length = 612

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 637 RALSCSDPCRXPDTCPPFSLREAWRFLIAHA 729
           R L+C   C  P  CPP+S    W+ ++  A
Sbjct: 466 RELNCKSICHSP-MCPPYSAMTEWQHMVLSA 495


>01_01_1201 + 9678893-9679311,9679415-9679721
          Length = 241

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -1

Query: 746 RTEIRTA*AMRKRHASRREKGGQVSGXRQGSEQESAR---GSFQGETPG 609
           R E     A  + HA+RR++ G   G   G+ QESAR   G+ + + PG
Sbjct: 11  RAEAAAHRAADELHAARRDEPGGGGGGMLGTVQESARSLLGAVRDKIPG 59


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 292 NESAN---ARGEAVCVLGALPLPRSLTRCAR 375
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,894,550
Number of Sequences: 37544
Number of extensions: 485886
Number of successful extensions: 1538
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)