Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_E03
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0249 - 19903154-19903454,19904114-19904168,19904707-199047...    30   2.2  
03_05_0564 - 25655095-25655106,25656089-25656541,25656886-256569...    29   3.9  
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147...    29   6.7  

>01_05_0249 -
           19903154-19903454,19904114-19904168,19904707-19904791,
           19905140-19905511
          Length = 270

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 764 ASSIGRKKKLTSIAMTSLYFLCRLRVSYCFFPTYADSLERLYQR 633
           ++ IG  K + S A     F C     Y  FP+++  L+ LY+R
Sbjct: 128 SNGIGSGKVINSAAPNKTEFFCSCAGHYTLFPSFSVELKLLYRR 171


>03_05_0564 -
           25655095-25655106,25656089-25656541,25656886-25656962,
           25657058-25657149,25657447-25657553,25657662-25657747,
           25657861-25657977,25658205-25658288,25658400-25658479,
           25658958-25659132,25659455-25659521,25660175-25660236,
           25660369-25660450,25660890-25661312,25661514-25661610,
           25662055-25662095,25662673-25662837
          Length = 739

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 402 ELMSQSGWRIYVVDVYGLQ*PLNTRWAVTASTHLSNKKKSFSPEYLSG 545
           +LM +S W  ++  + G+Q P       T       + K+F P YL G
Sbjct: 240 QLMFRSNWNDFLHTIKGIQLPSVDHLVSTIVQWFERRSKAFEPTYLYG 287


>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
            21814849-21815049,21815320-21815433,21815513-21815671,
            21816490-21816849,21816928-21817149,21817967-21818093,
            21818887-21819023,21819169-21819292,21819665-21820174,
            21820255-21820436,21820812-21820862,21821114-21821266,
            21821339-21821437,21821519-21821861,21821957-21822030,
            21822105-21823025,21823133-21823257,21823419-21823461,
            21823574-21823762,21824814-21825074,21825228-21825387,
            21826200-21826363,21826523-21827009,21827090-21827431,
            21827519-21827836,21828001-21828041,21828136-21828388,
            21829158-21829261,21830198-21830386,21830543-21831196,
            21831320-21831610,21831739-21831882,21832107-21832205,
            21832549-21832657,21832739-21832923,21833008-21833121,
            21833270-21833401,21833483-21833815,21833945-21834436,
            21834773-21834847,21834917-21835066,21835143-21835241,
            21835463-21835547,21837188-21837375,21837513-21837647,
            21837729-21837849,21838127-21838194,21838275-21838370,
            21838450-21838554,21838665-21838980,21839053-21839142,
            21840011-21840181,21840850-21841010,21841088-21841270,
            21841839-21841940,21842515-21842632,21842704-21842798,
            21842972-21843022,21843107-21843241,21843333-21843436,
            21844249-21844414,21844649-21844773,21845220-21845316
          Length = 4181

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = -2

Query: 482  SPPGVKWLLEPIDIYDVNAPPTLRHKFSQYSYNSCPTLQTETHY 351
            +P  +  +  P+ +Y +   PT  H+  QYS++     +++T Y
Sbjct: 2892 APIPLSGISNPVVLYTLQLRPTNHHELVQYSWSDVQERRSQTEY 2935


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,868,513
Number of Sequences: 37544
Number of extensions: 403372
Number of successful extensions: 771
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)