Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_D22
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB029030-1|BAA83059.1| 1278|Homo sapiens KIAA1107 protein protein.     31   5.6  

>AB029030-1|BAA83059.1| 1278|Homo sapiens KIAA1107 protein protein.
          Length = 1278

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 1/156 (0%)
 Frame = +1

Query: 328 SMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQGNDDLDWNYNIFKDER 507
           +MP   NQSK    +    S+ K+ P Q  S T   S+     + +      ++  +D  
Sbjct: 404 AMPKNLNQSKKGETLNNKDSKQKMPPGQVISKTQPSSQRPLKHETSTVQKSMFHDVRDNN 463

Query: 508 NNSVISVSXXXXXXXXLKELRYFVENRTKNCFEDARMAITPVVKSS-TLEAGGVRNIKRS 684
           N   +S          L       E    +C  D +  +    K    LE   +  + +S
Sbjct: 464 NKDSVSEQKPHKPLINLASEISDAEALQSSCRPDPQKPLNDQEKEKLALECQNISKLDKS 523

Query: 685 LKRHIAGSCKVSLRWKNXREKPKKESREDYXLTSVC 792
           LK H   S ++ L  K+  + P  +  +D    ++C
Sbjct: 524 LK-HELESKQICLD-KSETKFPNHKETDDCDAANIC 557


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,678,022
Number of Sequences: 237096
Number of extensions: 1883015
Number of successful extensions: 4747
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4738
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)