Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_D22
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 31 0.84
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 31 0.84
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 30 2.6
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 29 3.4
U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 29 3.4
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 29 3.4
Z77659-7|CAB01166.2| 137|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical ... 29 5.9
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 286 FENSRQPLKTINSQSMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQG- 462
+ N QP + S+ G S++S + +P ++ G PN SP S+ + T G
Sbjct: 12 YTNKNQPGRNSLSRHESGDSSRSTQGHASLPRNTVGPPDPN-ALSPEGLVSRPLNTGVGP 70
Query: 463 NDDLDWNYNIFKDERNN 513
N + YN F ++ N
Sbjct: 71 NQQVQEQYNAFSNQNEN 87
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 205 PQTRIPLPMEPLPALPRHLLKEINFKAF-ENSRQPLKTINSQSMP--GQSNQSKSFNPMV 375
P+T L EP+ +P +K + AF E S + +++ + P QS + + N +
Sbjct: 283 PKTSTTLTPEPITTVPAKDVKPVTLLAFQEVSNEVTSNVSNVTQPTVDQSTSANNLNEIG 342
Query: 376 PGHSRGKIAPNQPKSPTNFDSKHVT 450
G +A ++P PT +SK VT
Sbjct: 343 EGSGTEPLATSEP-HPT--ESKFVT 364
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 220 PLPMEPLPALPRHLLKEINFKAFENSRQPLKTIN---SQSMPGQSNQSKSFNPMVPGHSR 390
P P PLP + R K +N + F ++ QP+++ + + +S P+VP ++
Sbjct: 243 PPPPLPLPPVRRRAPKVLNLQKFIDAYQPVQSTGYPIGTPAAAAAVEKESAAPVVPENAE 302
Query: 391 GKIAP 405
++AP
Sbjct: 303 KEVAP 307
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +1
Query: 145 ESLRVAIKMEANKENENRFIPQTRIPLPMEPLPALPRHLLKEINFKAFENSRQPLKTINS 324
ESLR +++E K++E RF P I + L L L ++ A NS + N
Sbjct: 573 ESLRTLLQLEGIKKDEIRFTPTVTIANAAKALAELA--LAVPVDLTAIWNSGNSQNSQNP 630
Query: 325 QSMPGQSNQSKSFNP 369
Q+ P ++ S NP
Sbjct: 631 QN-PEKNGSKISKNP 644
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 319 NSQSMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQGNDD-LDWNYNIF 495
+S S + N+ F P+ SRG + PKSP + TRQ +DD D N F
Sbjct: 618 DSDSDNEEGNEPLMFKPINASSSRGALPDLLPKSPQLRRQINDQTRQMSDDRADEQPNGF 677
Query: 496 KDERNNSVISVS 531
++ + S I S
Sbjct: 678 QNSDSRSSIQHS 689
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 319 NSQSMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQGNDD-LDWNYNIF 495
+S S + N+ F P+ SRG + PKSP + TRQ +DD D N F
Sbjct: 628 DSDSDNEEGNEPLMFKPINASSSRGALPDLLPKSPQLRRQINDQTRQMSDDRADEQPNGF 687
Query: 496 KDERNNSVISVS 531
++ + S I S
Sbjct: 688 QNSDSRSSIQHS 699
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 319 NSQSMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQGNDD-LDWNYNIF 495
+S S + N+ F P+ SRG + PKSP + TRQ +DD D N F
Sbjct: 633 DSDSDNEEGNEPLMFKPINASSSRGALPDLLPKSPQLRRQINDQTRQMSDDRADEQPNGF 692
Query: 496 KDERNNSVISVS 531
++ + S I S
Sbjct: 693 QNSDSRSSIQHS 704
>U56964-7|AAB54034.1| 382|Caenorhabditis elegans Hypothetical
protein F52E4.8 protein.
Length = 382
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +1
Query: 262 LKEINFKAFENSRQPLKTINSQSMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSK 441
+K +++ S KT+ +MP Q KS P+ PG S G++ S + +
Sbjct: 238 IKRSPSESYVPSATVFKTLTFSTMPPQVKFKKSSRPVPPGKSLGEVVSKMAASQPQYTVR 297
Query: 442 HVTTRQG 462
+G
Sbjct: 298 SAPYSKG 304
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 29.5 bits (63), Expect = 3.4
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 205 PQTRIPLPMEPLPALPRHLLKEINFKAFENSRQPL--KTINSQSMPGQSNQSKSFNPMVP 378
P+T IP P EP + K+ N E +QP K P QSN+++ P
Sbjct: 1330 PKTSIPPPTEPEKPIKPSEQKKPNAIPVERPKQPTPSKARTPSKTPSQSNRAQH-----P 1384
Query: 379 GHSRGKIAPNQPKSPTNFDSKHV 447
S IAP +PT+ D HV
Sbjct: 1385 ASSPAPIAPT--SAPTD-DFVHV 1404
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 319 NSQSMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQGNDD-LDWNYNIF 495
+S S + N+ F P+ SRG + PKSP + TRQ +DD D N F
Sbjct: 338 DSDSDNEEGNEPLMFKPINASSSRGALPDLLPKSPQLRRQINDQTRQMSDDRADEQPNGF 397
Query: 496 KDERNNSVISVS 531
++ + S I S
Sbjct: 398 QNSDSRSSIQHS 409
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 319 NSQSMPGQSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQGNDD-LDWNYNIF 495
+S S + N+ F P+ SRG + PKSP + TRQ +DD D N F
Sbjct: 633 DSDSDNEEGNEPLMFKPINASSSRGALPDLLPKSPQLRRQINDQTRQMSDDRADEQPNGF 692
Query: 496 KDERNNSVISVS 531
++ + S I S
Sbjct: 693 QNSDSRSSIQHS 704
>Z77659-7|CAB01166.2| 137|Caenorhabditis elegans Hypothetical
protein F23B12.4 protein.
Length = 137
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 340 QSNQSKSFNPMVPGHSRGKIAPNQPKSPTNFDSKHVTTRQGNDD 471
Q ++F P +P R +I QP+SP N + ++ R+G +
Sbjct: 34 QPTFQQTFRP-IPARPRQRIVAQQPQSPFNRQNVFISRRRGQSN 76
>AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical
protein T26C12.1 protein.
Length = 640
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +1
Query: 136 FIIESLRVAIKMEANKENENRFIPQTRIPLPMEPLPALPRHLLKEINFKAFENSRQPLKT 315
FI +L ++ +++ N + PQT PLP +P ++EI + +++++P+
Sbjct: 236 FIQRALNFYLRCHVSRQFGNAWAPQTITPLPTN-IPMPKSEKIQEI-VQLVKSAKRPVLL 293
Query: 316 INSQS 330
I SQ+
Sbjct: 294 IGSQA 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,001,422
Number of Sequences: 27780
Number of extensions: 328000
Number of successful extensions: 929
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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