Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_D19
         (959 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1124 - 34279570-34279765,34280074-34280158,34280236-342802...    60   3e-09
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164...    44   2e-04
01_01_0778 + 6024154-6024315,6024725-6024802,6024909-6025071,602...    32   0.59 
05_01_0541 - 4677830-4678672,4678765-4679241                           28   9.6  

>02_05_1124 -
           34279570-34279765,34280074-34280158,34280236-34280275,
           34280371-34280460
          Length = 136

 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
 Frame = +1

Query: 319 LVSLAXAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGSNSA- 495
           L  LA   S G+   ILACAL  Y  WWP   VL Y++ P+P +        +  SN   
Sbjct: 14  LALLAILVSGGIVLQILACAL--YNNWWPMLTVLMYLILPMPLIFFLGSNSPSMMSNDGD 71

Query: 496 -CMETAVFITMGFLVSSFALPIVLARAGVXFWGACYLTLA 612
             +    F+T   +V S A+P +L  AGV  WGA  + L+
Sbjct: 72  TWVSFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELS 111


>01_07_0303 +
           42615578-42615709,42616273-42616312,42616393-42616477,
           42616634-42616813,42618274-42618354,42618890-42619011,
           42619867-42620723,42621656-42621897,42622107-42622200,
           42622306-42622476,42622695-42622740,42624101-42624111,
           42624141-42624392
          Length = 770

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +1

Query: 370 ACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDG--AGGSNSACMETAVFITMGFLVSS 543
           ACAL  Y  WWP    L Y+L P+P +     +               A F+T    + S
Sbjct: 45  ACAL--YNNWWPMLAALMYVLVPMPCLFFGGGSTQFLTSRDGGGWFNAAKFLTGASAMGS 102

Query: 544 FALPIVLARAGVXFWGACYL 603
            A+P +L  AG+   GA ++
Sbjct: 103 IAIPAILRHAGLIETGAMFI 122


>01_01_0778 +
           6024154-6024315,6024725-6024802,6024909-6025071,
           6025484-6025788,6025897-6025961,6026570-6026763,
           6027233-6027441,6028147-6028325,6029345-6029459,
           6029520-6029558
          Length = 502

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 382 PQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGSNSACMETAVFITMGFL 534
           P Y+   P    LF++  PI   +ARR    + G N A + T +F  +GFL
Sbjct: 165 PFYRKPTPAMGGLFFV--PIGIFVARRQVGSSTGVNGAAIITLIFAMVGFL 213


>05_01_0541 - 4677830-4678672,4678765-4679241
          Length = 439

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +1

Query: 484 SNSACMETAVFITMGFLVSSFALPIVLARAGVXFWGACYLTLAV 615
           + +A  + +  I + F ++  A P++L R G  F+G CY  + V
Sbjct: 275 TRAAAFDPSTPINLSFAMN--ARPLLLPRGGAGFYGNCYYIMRV 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,699,264
Number of Sequences: 37544
Number of extensions: 281999
Number of successful extensions: 559
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)