Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_D19
         (959 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23450-3|AAN39678.1|  132|Caenorhabditis elegans Hypothetical pr...   115   4e-26
U23450-4|AAN39679.1|  130|Caenorhabditis elegans Hypothetical pr...   108   5e-24
AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical ...    29   6.5  

>U23450-3|AAN39678.1|  132|Caenorhabditis elegans Hypothetical
           protein C30B5.2a protein.
          Length = 132

 Score =  115 bits (277), Expect = 4e-26
 Identities = 51/99 (51%), Positives = 71/99 (71%)
 Frame = +1

Query: 307 GIXGLVSLAXAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGS 486
           G+  + +LA AG +G+TF++L CALP+Y  W P FV+ FY+L P+P +IARR  +   G+
Sbjct: 3   GVRAVAALAFAGVVGLTFLVLGCALPRYGTWTPMFVITFYVLSPVPLLIARRFQEDMTGT 62

Query: 487 NSACMETAVFITMGFLVSSFALPIVLARAGVXFWGACYL 603
           N AC+E A+FIT G ++S+FALPIVLA AG     AC+L
Sbjct: 63  N-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFL 100


>U23450-4|AAN39679.1|  130|Caenorhabditis elegans Hypothetical
           protein C30B5.2b protein.
          Length = 130

 Score =  108 bits (260), Expect = 5e-24
 Identities = 50/99 (50%), Positives = 70/99 (70%)
 Frame = +1

Query: 307 GIXGLVSLAXAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGS 486
           G+  + +LA AG +G+TF++L CALP  + W P FV+ FY+L P+P +IARR  +   G+
Sbjct: 3   GVRAVAALAFAGVVGLTFLVLGCALP--RTWTPMFVITFYVLSPVPLLIARRFQEDMTGT 60

Query: 487 NSACMETAVFITMGFLVSSFALPIVLARAGVXFWGACYL 603
           N AC+E A+FIT G ++S+FALPIVLA AG     AC+L
Sbjct: 61  N-ACIELALFITTGIVISAFALPIVLAHAGTIANSACFL 98


>AF026212-2|AAF99972.1| 1009|Caenorhabditis elegans Hypothetical
           protein F52G3.4 protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 474 CWRFKFRLYGNCSIYHNGIFSQLFC 548
           C+R++ RLY  C   H+G   +L+C
Sbjct: 736 CYRYQDRLYYVCRFQHHGSIIELWC 760


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,497,654
Number of Sequences: 27780
Number of extensions: 245747
Number of successful extensions: 509
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)