Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_D13
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104663-1|AAI04664.1| 99|Homo sapiens ESF1 protein protein. 89 1e-17
BC062214-1|AAH62214.1| 110|Homo sapiens ESF1 protein protein. 89 1e-17
BC046107-1|AAH46107.1| 595|Homo sapiens ESF1 protein protein. 89 1e-17
BC039706-1|AAH39706.2| 294|Homo sapiens ESF1 protein protein. 89 1e-17
BC030513-1|AAH30513.1| 595|Homo sapiens ESF1 protein protein. 89 1e-17
AL161659-1|CAC07199.1| 851|Homo sapiens chromosome 20 open read... 89 1e-17
AK022369-1|BAB14023.1| 589|Homo sapiens protein ( Homo sapiens ... 89 1e-17
BC020952-1|AAH20952.1| 552|Homo sapiens Unknown (protein for IM... 54 9e-07
AF068285-1|AAF65504.1| 458|Homo sapiens HDCMC28P protein. 52 3e-06
AK000375-1|BAA91123.1| 551|Homo sapiens protein ( Homo sapiens ... 51 5e-06
BC030645-1|AAH30645.1| 364|Homo sapiens platelet derived growth... 33 1.3
AY359116-1|AAQ89474.1| 364|Homo sapiens SCDGF-B protein. 33 1.3
AY027518-1|AAK20082.1| 364|Homo sapiens iris-expressed growth f... 33 1.3
AY027517-1|AAK20081.1| 370|Homo sapiens iris-expressed growth f... 33 1.3
AF336376-1|AAK56136.1| 370|Homo sapiens platelet-derived growth... 33 1.3
AF335584-1|AAK38840.1| 370|Homo sapiens platelet-derived growth... 33 1.3
AB033832-1|BAB18903.1| 370|Homo sapiens spinal cord-derived gro... 33 1.3
BC060851-1|AAH60851.1| 742|Homo sapiens LOC401010 protein protein. 31 4.1
>BC104663-1|AAI04664.1| 99|Homo sapiens ESF1 protein protein.
Length = 99
Score = 89.4 bits (212), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = +2
Query: 176 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTE 355
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRPI+ ++TE
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTE 66
Query: 356 NLRKYY 373
+L+++Y
Sbjct: 67 DLKRFY 72
>BC062214-1|AAH62214.1| 110|Homo sapiens ESF1 protein protein.
Length = 110
Score = 89.4 bits (212), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = +2
Query: 176 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTE 355
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRPI+ ++TE
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTE 66
Query: 356 NLRKYY 373
+L+++Y
Sbjct: 67 DLKRFY 72
>BC046107-1|AAH46107.1| 595|Homo sapiens ESF1 protein protein.
Length = 595
Score = 89.4 bits (212), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = +2
Query: 176 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTE 355
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRPI+ ++TE
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTE 66
Query: 356 NLRKYY 373
+L+++Y
Sbjct: 67 DLKRFY 72
Score = 53.6 bits (123), Expect = 9e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 656 WGELDADAETTEESTRRIAICNMDWDXIKASDL 754
W ELD DA +E TRR+A+CNMDWD +KA DL
Sbjct: 333 WRELDKDAPRADEITRRLAVCNMDWDRLKAKDL 365
>BC039706-1|AAH39706.2| 294|Homo sapiens ESF1 protein protein.
Length = 294
Score = 89.4 bits (212), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = +2
Query: 176 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTE 355
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRPI+ ++TE
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTE 66
Query: 356 NLRKYY 373
+L+++Y
Sbjct: 67 DLKRFY 72
>BC030513-1|AAH30513.1| 595|Homo sapiens ESF1 protein protein.
Length = 595
Score = 89.4 bits (212), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = +2
Query: 176 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTE 355
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRPI+ ++TE
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTE 66
Query: 356 NLRKYY 373
+L+++Y
Sbjct: 67 DLKRFY 72
Score = 53.6 bits (123), Expect = 9e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 656 WGELDADAETTEESTRRIAICNMDWDXIKASDL 754
W ELD DA +E TRR+A+CNMDWD +KA DL
Sbjct: 333 WRELDKDAPRADEITRRLAVCNMDWDRLKAKDL 365
>AL161659-1|CAC07199.1| 851|Homo sapiens chromosome 20 open reading
frame 6 protein.
Length = 851
Score = 89.4 bits (212), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = +2
Query: 176 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTE 355
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRPI+ ++TE
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTE 66
Query: 356 NLRKYY 373
+L+++Y
Sbjct: 67 DLKRFY 72
Score = 53.6 bits (123), Expect = 9e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 656 WGELDADAETTEESTRRIAICNMDWDXIKASDL 754
W ELD DA +E TRR+A+CNMDWD +KA DL
Sbjct: 333 WRELDKDAPRADEITRRLAVCNMDWDRLKAKDL 365
>AK022369-1|BAB14023.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ12307 fis, clone MAMMA1001908. ).
Length = 589
Score = 89.4 bits (212), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = +2
Query: 176 ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTE 355
I+ D RF + DPR+ ++P+ +RKVKIDKRF+ MF D+KFK+ Y VDKRGRPI+ ++TE
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTE 66
Query: 356 NLRKYY 373
+L+++Y
Sbjct: 67 DLKRFY 72
Score = 53.6 bits (123), Expect = 9e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 656 WGELDADAETTEESTRRIAICNMDWDXIKASDL 754
W ELD DA +E TRR+A+CNMDWD +KA DL
Sbjct: 333 WRELDKDAPRADEITRRLAVCNMDWDRLKAKDL 365
>BC020952-1|AAH20952.1| 552|Homo sapiens Unknown (protein for
IMAGE:3850711) protein.
Length = 552
Score = 53.6 bits (123), Expect = 9e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 656 WGELDADAETTEESTRRIAICNMDWDXIKASDL 754
W ELD DA +E TRR+A+CNMDWD +KA DL
Sbjct: 242 WRELDKDAPRADEITRRLAVCNMDWDRLKAKDL 274
>AF068285-1|AAF65504.1| 458|Homo sapiens HDCMC28P protein.
Length = 458
Score = 52.0 bits (119), Expect = 3e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 656 WGELDADAETTEESTRRIAICNMDWDXIKASDL 754
W ELD DA +E TRR+ +CNMDWD +KA DL
Sbjct: 124 WRELDKDAPRADEITRRLVVCNMDWDRLKAKDL 156
>AK000375-1|BAA91123.1| 551|Homo sapiens protein ( Homo sapiens
cDNA FLJ20368 fis, clone HEP18272. ).
Length = 551
Score = 51.2 bits (117), Expect = 5e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 656 WGELDADAETTEESTRRIAICNMDWDXIKASDL 754
W E D DA +E TRR+A+CNMDWD +KA DL
Sbjct: 194 WRESDKDAPRADEITRRLAVCNMDWDRLKAKDL 226
>BC030645-1|AAH30645.1| 364|Homo sapiens platelet derived growth
factor D protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 140 FKRTKDLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYT 313
F +DLLK N Q+ YL PRYR H+RK K+D + DD K +Y+
Sbjct: 211 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD--LDRLNDDAK---RYS 265
Query: 314 VDKRGRPIN 340
R +N
Sbjct: 266 CTPRNYSVN 274
>AY359116-1|AAQ89474.1| 364|Homo sapiens SCDGF-B protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 140 FKRTKDLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYT 313
F +DLLK N Q+ YL PRYR H+RK K+D + DD K +Y+
Sbjct: 211 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD--LDRLNDDAK---RYS 265
Query: 314 VDKRGRPIN 340
R +N
Sbjct: 266 CTPRNYSVN 274
>AY027518-1|AAK20082.1| 364|Homo sapiens iris-expressed growth
factor short form protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 140 FKRTKDLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYT 313
F +DLLK N Q+ YL PRYR H+RK K+D + DD K +Y+
Sbjct: 211 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD--LDRLNDDAK---RYS 265
Query: 314 VDKRGRPIN 340
R +N
Sbjct: 266 CTPRNYSVN 274
>AY027517-1|AAK20081.1| 370|Homo sapiens iris-expressed growth
factor long form protein.
Length = 370
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 140 FKRTKDLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYT 313
F +DLLK N Q+ YL PRYR H+RK K+D + DD K +Y+
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD--LDRLNDDAK---RYS 271
Query: 314 VDKRGRPIN 340
R +N
Sbjct: 272 CTPRNYSVN 280
>AF336376-1|AAK56136.1| 370|Homo sapiens platelet-derived growth
factor D protein.
Length = 370
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 140 FKRTKDLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYT 313
F +DLLK N Q+ YL PRYR H+RK K+D + DD K +Y+
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD--LDRLNDDAK---RYS 271
Query: 314 VDKRGRPIN 340
R +N
Sbjct: 272 CTPRNYSVN 280
>AF335584-1|AAK38840.1| 370|Homo sapiens platelet-derived growth
factor D protein.
Length = 370
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 140 FKRTKDLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYT 313
F +DLLK N Q+ YL PRYR H+RK K+D + DD K +Y+
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD--LDRLNDDAK---RYS 271
Query: 314 VDKRGRPIN 340
R +N
Sbjct: 272 CTPRNYSVN 280
>AB033832-1|BAB18903.1| 370|Homo sapiens spinal cord-derived growth
factor-B protein.
Length = 370
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 140 FKRTKDLLKMSN--ILQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYT 313
F +DLLK N Q+ YL PRYR H+RK K+D + DD K +Y+
Sbjct: 217 FDTVEDLLKYFNPESWQEDLENMYLDTPRYRGRSYHDRKSKVD--LDRLNDDAK---RYS 271
Query: 314 VDKRGRPIN 340
R +N
Sbjct: 272 CTPRNYSVN 280
>BC060851-1|AAH60851.1| 742|Homo sapiens LOC401010 protein protein.
Length = 742
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 558 ILTMLVVKVFCLRIVLQKQRVAIQKMIVKWSMNGESWMLMLKLLKSQHGESPFAIWTGIX 737
+L + V V C ++ R+ +++M+V WS ES ++ L+ S+ + G+
Sbjct: 268 VLWHISVLVPCFLTFPKQCRMLLKRMVVVWSTGEESLRVLAFLVLSRVCRHKKDTFLGLV 327
Query: 738 LKHRILMVLLN-SFIPPG 788
LK +M + N F PG
Sbjct: 328 LKQMYIMYVRNCKFTSPG 345
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,228,633
Number of Sequences: 237096
Number of extensions: 1625813
Number of successful extensions: 2746
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2739
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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