Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_D13
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73427-4|CAA97802.3|  601|Caenorhabditis elegans Hypothetical pr...    51   1e-06
AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical ...    31   1.4  
AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical ...    28   7.5  

>Z73427-4|CAA97802.3|  601|Caenorhabditis elegans Hypothetical
           protein F58B3.4 protein.
          Length = 601

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 19/211 (9%)
 Frame = +2

Query: 179 LQDSRFTKYLSDPRYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTEN 358
           L D RF++  S+P +  +   E+KV IDKRF     DE+F  +  VD RGR   +T   +
Sbjct: 13  LNDERFSQIKSNPMFVGLKNSEKKVVIDKRFAAALTDERFSTRAKVDMRGRKQKKTVGNS 72

Query: 359 LRKYYXXXXXXXXXXXXXXXXXXP---------GRFVKRPSTDDESIDKIDPKTLNDKLT 511
           +   Y                              F      D+++++  D +       
Sbjct: 73  MLDLYELEEDEEVQPLKKEKISKKTTKDEDDELDDFFDEKDDDEDALEDADDEEDEISDE 132

Query: 512 RGKLDKKIKTRLLDLD----IDYARGEGVLLTXXXXXXXXXXXXXXXXXXXXWG-ELD-- 670
             + +++ +   + ++    +D ARGEG + +                     G ELD  
Sbjct: 133 ENEDEEEEENEKIGMNGFKRLDLARGEGNVDSSSDDDSSEDEGEDVEFDEKEGGIELDLA 192

Query: 671 ---ADAETTEESTRRIAICNMDWDXIKASDL 754
               + +  E ++ R+A+CN++WD +   D+
Sbjct: 193 NLDREVDQVEWTSNRLAVCNLEWDTMNCEDI 223


>AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical
           protein E01A2.2a protein.
          Length = 712

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +2

Query: 218 RYRQIPKHERKVKIDKRFQPMFDDEKFKVKYTVDKRGRPINETSTENLRK 367
           +Y +     RK ++++ F+   D+E F++KY  D   + + E   EN++K
Sbjct: 106 KYNEYKTEHRKHQLERFFRAHKDEEWFRLKYKPDD-AKKLREAHLENVQK 154


>AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical
           protein Y113G7A.1 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 584 HLHHEHSQYLNPII*S*FFCLVFHGLICHLM 492
           ++HH++ Q LN +I    FCL FHG++  L+
Sbjct: 261 YIHHQN-QLLNNLI---VFCLAFHGIVSTLI 287


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,434,659
Number of Sequences: 27780
Number of extensions: 275353
Number of successful extensions: 649
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)