Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_D07
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 450 e-127
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 3e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 3e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 5e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 5e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 1e-19
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 44 2e-05
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 4e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 3e-04
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.38
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 3.5
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 27 4.6
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 6.1
SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyce... 26 6.1
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 450 bits (1109), Expect = e-127
Identities = 221/236 (93%), Positives = 230/236 (97%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 323 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 502
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 503 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 682
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 683 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQKEXTLHXVLRLXGGMQIXVKXL 850
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY IQKE TLH VLRL GGMQI VK L
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 236
Score = 450 bits (1109), Expect = e-127
Identities = 221/236 (93%), Positives = 230/236 (97%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 323 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 502
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 196
Query: 503 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 682
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 256
Query: 683 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQKEXTLHXVLRLXGGMQIXVKXL 850
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY IQKE TLH VLRL GGMQI VK L
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL 312
Score = 441 bits (1086), Expect = e-125
Identities = 215/229 (93%), Positives = 225/229 (98%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 323 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 502
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 272
Query: 503 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 682
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 332
Query: 683 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQKEXTLHXVLRLXGGM 829
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY IQKE TLH VLRL GG+
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 323 IQKESTLHLVLRLRGG-MQIFVKTLTGK 403
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 371 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 550
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 551 IQKESTLHLVLRLRGG-MQIFVKTLTGK 631
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 143 bits (347), Expect = 3e-35
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +2
Query: 599 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 778
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 779 IQKEXTLHXVLRLXGGM 829
IQKE TLH VLRL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 323 IQKESTLHLVLRLRGG-MQIFVKTLTGK 403
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 3e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 371 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 550
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 551 IQKESTLHLVLRLRGG-MQIFVKTLTGK 631
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 143 bits (347), Expect = 3e-35
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +2
Query: 599 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 778
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 779 IQKEXTLHXVLRLXGGM 829
IQKE TLH VLRL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 323 IQKESTLHLVLRLRGG 370
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 371 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 550
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 551 IQKESTLHLVLRLRGG 598
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 143 bits (346), Expect = 3e-35
Identities = 69/76 (90%), Positives = 72/76 (94%)
Frame = +2
Query: 599 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 778
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 779 IQKEXTLHXVLRLXGG 826
IQKE TLH VLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 323 IQKESTLHLVLRLRGG 370
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 5e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 371 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 550
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 551 IQKESTLHLVLRLRGG 598
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 143 bits (346), Expect = 3e-35
Identities = 69/76 (90%), Positives = 72/76 (94%)
Frame = +2
Query: 599 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 778
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 779 IQKEXTLHXVLRLXGG 826
IQKE TLH VLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 143 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 322
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 323 IQKESTLHLVLRLRGG 370
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 371 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 550
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 551 IQKESTLHLVLRLRGG 598
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 84.6 bits (200), Expect = 2e-17
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 599 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 778
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 779 IQKEXTLHXVLRLXGG 826
++ LH VL L GG
Sbjct: 61 LEGGSVLHLVLALRGG 76
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +2
Query: 137 TTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 316
T + + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L
Sbjct: 2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
Query: 317 YNIQKESTLHLVLRL 361
Y IQ ++HLV L
Sbjct: 62 YKIQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 9e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 371 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 550
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 551 IQKESTLHLVLRL 589
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 39.9 bits (89), Expect = 5e-04
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 599 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 778
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 779 IQKEXTLHXVLRL 817
IQ ++H V L
Sbjct: 64 IQDGHSIHLVKTL 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 4e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +2
Query: 173 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 334
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 4e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +2
Query: 401 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 562
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 170 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 343
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 398 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 571
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 626 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQKEXTL 799
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.3 bits (65), Expect = 0.38
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Frame = -1
Query: 705 IPSLS*IFAFTFSMVSDASTSSVMVL-PVSVFTKICMPPLRRNTKCRVDSF*ML*SDNVR 529
+PS + F+ T S + +ST S +L P SV + I P + + + S + SD
Sbjct: 114 LPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAIL--PSSTSVEVSISSSSLSSSD--- 168
Query: 528 PSSSCLPAKINRC*SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTKICIPPLKRNT 349
P +S + ++ S PS+S + TFS + STSS + SV + P ++
Sbjct: 169 PLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSS 228
Query: 348 KWRVDSF*IL*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSN 184
S + SSS + +S S S S + + S++S +S+S+
Sbjct: 229 TLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSS---SSSSSIISSSSSSS 280
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 146 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 319
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 320 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 409
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 374 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 547
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 548 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 637
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 667 NGVRCFNF*CDGFTGKCFHKDLHATS 590
+G + +N CD F GKCFHK ATS
Sbjct: 21 DGYKIYN--CDPF-GKCFHKIQGATS 43
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 457 LGFHILNGVRCFNF*CDGFTGKCFHKDLHSTS 362
L +G + +N CD F GKCFHK +TS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 6.1
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = -1
Query: 486 SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTK-----ICIPPLKRNTKWRVDSF*I 322
S IPS + + ++ S A++S VSV T + +PP +T SF
Sbjct: 146 STSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTS----SFST 201
Query: 321 L*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSNVMVLPVRVFTKICM 142
+ + ++ PSSS F + G P + S++S AS S+ VLP + T
Sbjct: 202 ITNTSMIPSSSSFTT------TTGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITSTST 255
Query: 141 VVSFWNS 121
V+ +S
Sbjct: 256 PVTVSSS 262
>SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 710 EEFPLCPESLLSHSQWCQMLQL 645
EEF LC ESLL+H +QL
Sbjct: 345 EEFKLCKESLLAHKNSIYDVQL 366
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,513,984
Number of Sequences: 5004
Number of extensions: 73244
Number of successful extensions: 253
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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