Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_D06
         (959 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   0.37 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.84 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   3.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect(2) = 0.37
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 543 PPPPPPXKXGXPG 581
           PPPPPP     PG
Sbjct: 785 PPPPPPPSSLSPG 797



 Score = 23.0 bits (47), Expect(2) = 0.37
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 537 GXPPPPPP 560
           G PPPPPP
Sbjct: 781 GSPPPPPP 788


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +1

Query: 511 PXGGGGXXXGXXXXXXXXXRGXPGXXGGGG 600
           P  GGG   G          G PG  GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 14/46 (30%), Positives = 14/46 (30%)
 Frame = +1

Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPP 639
           PP P G  G             RG PG  G  G P        P P
Sbjct: 105 PPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGP 150


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 21.8 bits (44), Expect(2) = 3.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 580 PGXPXFXGGGGGG 542
           P  P   GGGGGG
Sbjct: 7   PASPLRAGGGGGG 19



 Score = 21.0 bits (42), Expect(2) = 3.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 559 GGGGGGXP 536
           GGGGGG P
Sbjct: 19  GGGGGGGP 26


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 525 GXXXGXPPPPPP 560
           G   G PPPPPP
Sbjct: 525 GGPLGPPPPPPP 536



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 816 PLXXPKXXPPSPPX*NPPP 872
           P   P   PP PP   PPP
Sbjct: 577 PNAQPPPAPPPPPPMGPPP 595


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,736
Number of Sequences: 2352
Number of extensions: 8682
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105430005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)