Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_D06
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 41 0.001
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.011
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.011
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.011
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.099
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.099
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.53
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.53
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.93
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 0.93
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 0.93
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.6
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 30 2.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 2.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 2.6
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.7
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.7
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 4.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.9
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 29 6.5
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 29 6.5
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 8.6
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 28 8.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 28 8.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.6
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 28 8.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPPP G G G P G PPP G PPPP G
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 682 APPP 693
PPP
Sbjct: 299 PPPP 302
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXG-XXPPPPXXG 648
PPPP G P GG PPP G PPPP G
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 5/64 (7%)
Frame = +3
Query: 537 GXPPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKNFXXXP-----GXPPPXX 701
G PPPPPP K G P PPP G P G PPP
Sbjct: 235 GSPPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 702 KXGP 713
P
Sbjct: 294 AGSP 297
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 19/62 (30%)
Frame = +1
Query: 505 PPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXXA 684
PPP G P GG PP G PPPP + + +
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Query: 685 PP 690
PP
Sbjct: 349 PP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPPP G G G P G PPP G PPPP G
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 682 APPP 693
PPP
Sbjct: 320 PPPP 323
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXG-XXPPPPXXG 648
PPPP G P GG PPP G PPPP G
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 5/64 (7%)
Frame = +3
Query: 537 GXPPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKNFXXXP-----GXPPPXX 701
G PPPPPP K G P PPP G P G PPP
Sbjct: 256 GSPPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 702 KXGP 713
P
Sbjct: 315 AGSP 318
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 19/62 (30%)
Frame = +1
Query: 505 PPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXXA 684
PPP G P GG PP G PPPP + + +
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Query: 685 PP 690
PP
Sbjct: 370 PP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPPP G G G P G PPP G PPPP G
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 682 APPP 693
PPP
Sbjct: 305 PPPP 308
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXG-XXPPPPXXG 648
PPPP G P GG PPP G PPPP G
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 5/64 (7%)
Frame = +3
Query: 537 GXPPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKNFXXXP-----GXPPPXX 701
G PPPPPP K G P PPP G P G PPP
Sbjct: 241 GSPPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 702 KXGP 713
P
Sbjct: 300 AGSP 303
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/62 (25%), Positives = 19/62 (30%)
Frame = +1
Query: 505 PPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXXA 684
PPP G P GG PP G PPPP + + +
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Query: 685 PP 690
PP
Sbjct: 355 PP 356
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPPP GG G P GG PPP G PPPP F
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGP 784
Query: 682 APPP 693
PPP
Sbjct: 785 PPPP 788
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPP 638
PPP G G PPPPPP G P PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.5 bits (73), Expect = 0.23
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPP 560
PPP GG G PPPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPP------PPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKN 665
PPP G G PPPP PP G P PPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--- 769
Query: 666 FXXXPGXPPPXXKXGP 713
P PP K GP
Sbjct: 770 -PPPPPPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPPP GG G P GG PPP G PPPP F
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGP 784
Query: 682 APPP 693
PPP
Sbjct: 785 PPPP 788
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPP 638
PPP G G PPPPPP G P PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.5 bits (73), Expect = 0.23
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPP 560
PPP GG G PPPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPP------PPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKN 665
PPP G G PPPP PP G P PPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--- 769
Query: 666 FXXXPGXPPPXXKXGP 713
P PP K GP
Sbjct: 770 -PPPPPPPPGGFKGGP 784
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPPP GG G P GG PPP G PPPP F
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--FKGGP 367
Query: 682 APPP 693
PPP
Sbjct: 368 PPPP 371
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPP 638
PPP G G PPPPPP G P PPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 33.5 bits (73), Expect = 0.23
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPP 560
PPP GG G PPPPPP
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/76 (30%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPP------PPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKN 665
PPP G G PPPP PP G P PPP G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP--- 352
Query: 666 FXXXPGXPPPXXKXGP 713
P PP K GP
Sbjct: 353 -PPPPPPPPGGFKGGP 367
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 517 GGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPP 639
GGGG G G G GGGG P PPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 517 GGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPP 639
GGGG G G G GGGG P PPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPPXKXGXP 578
PPP GG PPPPPP G P
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGGP 66
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 504 PPPXXGGGXXX--GXPPPPPPXKXGXPG 581
PPP G G PPPPPP + G PG
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPG 329
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPPXKXGXPG 581
PPP G PPPPP G PG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPG 312
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = +3
Query: 498 KXPPPXXGGGXXXGXPPPP-----PPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXK 662
+ PPP G PPPP PP G P PPP G +
Sbjct: 286 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
Query: 663 NFXXXPGXPPPXXKXGP 713
P PP GP
Sbjct: 346 GMPPPP--PPRYPSAGP 360
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 4/68 (5%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPP----XKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKNFX 671
PPP G G PPPPP G P PPP
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
Query: 672 XXPGXPPP 695
P PPP
Sbjct: 380 MIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 504 PPPXXGGGXXX--GXPPPPPPXKXGXPG 581
PPP G G PPPPPP + G PG
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPG 339
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPPXKXGXPG 581
PPP G PPPPP G PG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPG 322
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = +3
Query: 498 KXPPPXXGGGXXXGXPPPP-----PPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXK 662
+ PPP G PPPP PP G P PPP G +
Sbjct: 296 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
Query: 663 NFXXXPGXPPPXXKXGP 713
P PP GP
Sbjct: 356 GMPPPP--PPRYPSAGP 370
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 4/68 (5%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPP----XKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKNFX 671
PPP G G PPPPP G P PPP
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
Query: 672 XXPGXPPP 695
P PPP
Sbjct: 390 MIPPPPPP 397
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +1
Query: 397 GXPXGGGXXGGXXXXALXXXXXXXXXXXXXXXXKXPPPPXGGGGXXXGXXXXXXXXXRGX 576
G GGG GG PPPP GGG G G
Sbjct: 78 GCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGG 137
Query: 577 PGXXGGGG 600
G GGGG
Sbjct: 138 GGGCGGGG 145
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 511 PXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXG 648
P GGGG G G G GGGG PPPP G
Sbjct: 21 PSGGGGGGGGGCGGGC----GGGGGCGGGGGCGGGCAPPPPPPACG 62
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 507 PPXXGGGXXXGXPPPPPPXKXGXP 578
P GGG PPPPPP G P
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAP 43
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 507 PPXXGGGXXXGXPPPPPPXKXGXP 578
P GGG PPPPPP G P
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGP 43
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 519 GGGXXXGXPPPPPPXKXGXPG 581
GGG G PPPPP G G
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGG 42
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 507 PPXXGGGXXXGXPPPPPPXKXGXP 578
P GGG PPPPPP G P
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAP 43
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 558 GGGGGGXXXXXPPPXXGGG 502
GGGGGG PPP GGG
Sbjct: 22 GGGGGGCCAPPPPPPCGGG 40
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 505 PPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPP 639
PPP G GG P GG PPP G PPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPP-MMGGIPPPPPMFGAPPPPP 118
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXG----XKXXKIF 669
PPP G G G PG G G P G PPP G F
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGF 451
Query: 670 XXXXAPPP 693
APPP
Sbjct: 452 PPVGAPPP 459
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = -2
Query: 580 PGXPXF--XGGGGGGXPKXXP--PPXXGGG 503
PG P + GGGGGG P+ P PP GG
Sbjct: 7 PGGPMYGGAGGGGGGPPRGPPQQPPQPQGG 36
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 543 PPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKNFXXXPGXPPPXXKXGP 713
PPPPPP G PPP P PPP GP
Sbjct: 612 PPPPPPQSFG-----MAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
Frame = +3
Query: 504 PPPXX--GGGXXXGXPPPPPP 560
PPP G PPPPPP
Sbjct: 559 PPPTRVESHGLAPARPPPPPP 579
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.0 bits (52), Expect(2) = 2.6
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 543 PPPPPPXKXGXPGXXXXXXXXXXXXXXKXPPPXXGXKXXKNFXXXPGXPPPXXKXGP 713
PPPPPP G PPP P PPP GP
Sbjct: 438 PPPPPPQSFG-----MAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
Score = 23.4 bits (48), Expect(2) = 2.6
Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
Frame = +3
Query: 504 PPPXX--GGGXXXGXPPPPPP 560
PPP G PPPPPP
Sbjct: 385 PPPTRVESHGLAPARPPPPPP 405
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXP-PPXXGXXPPPP 639
PP P G G G PG GG G P PP P P
Sbjct: 108 PPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAP 154
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXP-PPXXGXXPPPP 639
PP P G G G PG GG G P PP P P
Sbjct: 108 PPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAP 154
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPP 560
PPP G G PPPPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 510 PXXGGGXXXGXPPPPPPXKXGXPG 581
P GGG PPPPPP G G
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGG 43
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 577 PGXXGGGGXPPPXXGXXPPPPXXG 648
P GG PPP G PPPP G
Sbjct: 782 PPRLQGGIPPPPPLGIIPPPPPPG 805
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 496 KXPPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXG 648
+ PP GG G +G P GG G PPP G P G
Sbjct: 165 RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/70 (34%), Positives = 24/70 (34%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPP GGGG RG PG G G PP G PP G
Sbjct: 154 PPPLMGGGGDP-----------RGPPG---GMGGPPGHGGMGGPPGHGGQGGPPGHGGMG 199
Query: 682 APPPLQXKXG 711
PPP Q G
Sbjct: 200 GPPPGQGGPG 209
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 496 KXPPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXG 648
+ PP GG G +G P GG G PPP G P G
Sbjct: 445 RGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/70 (34%), Positives = 24/70 (34%)
Frame = +1
Query: 502 PPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXGXKXXKIFXXXX 681
PPP GGGG RG PG G G PP G PP G
Sbjct: 434 PPPLMGGGGDP-----------RGPPG---GMGGPPGHGGMGGPPGHGGQGGPPGHGGMG 479
Query: 682 APPPLQXKXG 711
PPP Q G
Sbjct: 480 GPPPGQGGPG 489
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +1
Query: 496 KXPPPPXGGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXG 648
+ PPPP G G G PPP PPPP G
Sbjct: 62 RRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTG 112
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 504 PPPXXGGGXXXGXPPPPPPXKXGXPG 581
PPP G PPPPPP G G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGGLMG 601
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 577 PGXXGGGGXPPPXXGXXPPPPXXG 648
P GG PPP G PPPP G
Sbjct: 782 PPRLQGGIPPPPPLGIIPPPPPPG 805
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 519 GGGXXXGXPPPPPP 560
GGG G PPPPPP
Sbjct: 58 GGGYGCGIPPPPPP 71
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 517 GGGGXXXGXXXXXXXXXRGXPGXXGGGGXPPPXXGXXPPPPXXG 648
GGGG G G G G G PPP PPPP G
Sbjct: 38 GGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPP-----PPPPQCG 76
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 504 PPPXXGGGXXX-GXPPPPPPXKXGXP 578
PPP GG G PPP PP G P
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPPPNGGP 1610
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 556 GGGGGXPKXXPPPXXGGG 503
GGGGG P+ PPP GGG
Sbjct: 266 GGGGGYPQ--PPPQQGGG 281
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 525 GXXXGXPPPPPPXKXGXP 578
G G PPPPPP + G P
Sbjct: 607 GQQSGPPPPPPPSQQGTP 624
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 525 GXXXGXPPPPPPXKXGXP 578
G G PPPPPP + G P
Sbjct: 932 GQQSGPPPPPPPSQQGTP 949
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 525 GXXXGXPPPPPPXKXGXP 578
G G PPPPPP + G P
Sbjct: 932 GQQSGPPPPPPPSQQGTP 949
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 556 GGGGGXPKXXPPPXXGGG 503
GGGGG P PP GGG
Sbjct: 864 GGGGGPPGYQRPPYRGGG 881
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 576 GAPXXXGGGGGGXXXXXPPPXXGGG 502
G GGGGGG PPP GG
Sbjct: 30 GCGCGGGGGGGGCCAPPPPPPVCGG 54
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 519 GGGXXXGXPPPPPPXKXGXPG 581
GGG G PPPPP G G
Sbjct: 22 GGGGGCGCAPPPPPPACGCGG 42
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 571 GXPGXXGGGGXPPPXXGXXPPPP 639
G PG G G PPP PP P
Sbjct: 199 GVPGPDGDAGSPPPPGPPGPPGP 221
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -2
Query: 580 PGXPXFXGGGGGGXPKXXPP--PXXGGG 503
PG P G G GG P+ PP P GG
Sbjct: 219 PGAPRAGGSGAGGAPRPPPPAGPRAFGG 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,471,572
Number of Sequences: 27780
Number of extensions: 245320
Number of successful extensions: 3292
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2397
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -