Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_D02
         (909 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   7.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   7.6  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   7.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   7.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 603 PKRTQVVPRRHVWLXGDNSSNSADSRIYGPVPAG 704
           P+R Q  P+R  W  G+  S     ++ G    G
Sbjct: 2   PRRKQDCPKRMKWEGGEEGSPEEGDKLEGDEDTG 35


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 725 VSSVAIXTKITSLGGLCXNTFXXFXLVXVIIFXXVLNSXXLXG 853
           ++S+   TK+ ++ GL   +F    LV  IIF  +     + G
Sbjct: 12  LNSLKCITKVLTILGLLSCSFPKKKLVYCIIFGAIATLTCIEG 54


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 725 VSSVAIXTKITSLGGLCXNTFXXFXLVXVIIFXXVLNSXXLXG 853
           ++S+   TK+ ++ GL   +F    LV  IIF  +     + G
Sbjct: 8   LNSLKCITKVLTILGLLSCSFPKKKLVYCIIFGAIATLTCIEG 50


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 240 IKTWYTFSVLKQSNSLNSTPFITIS 166
           +K W  F+     N    TPFI ++
Sbjct: 464 VKLWTNFAKNGDPNPKEKTPFINVT 488


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 323 FFGKTCGFIGY 355
           F+GK C F GY
Sbjct: 368 FYGKNCEFSGY 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,703
Number of Sequences: 336
Number of extensions: 3773
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)