Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C24
         (924 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           30   0.11 
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    25   4.3  
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       24   7.5  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   9.9  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = -3

Query: 769 FPEGRKGGTGIPVKRXGSEXGERTXGAFQGETPGIFIVLSGFATSD--LSVDFCDARQGG 596
           +P G  G +   V   G+  G  T G   GE PG   +LS     +   SV + +     
Sbjct: 479 WPHGSGGSSSAVVAPSGASVGNATGGQLAGELPGQQRLLSRQPAPEYWCSVAYFELDTQV 538

Query: 595 GAYGKTPATRP 563
           G   K P+ RP
Sbjct: 539 GEMFKVPSNRP 549


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 514 LRYPLILWITVLPPLSELIP 455
           +RY  +LW+ +L  +S L+P
Sbjct: 4   VRYHFVLWLLILIGVSSLVP 23


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 168 YIDEFGQTTTXMQ*KKCFICEICDAIALFVT 260
           ++D  GQ T   +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 669  PGVSPWKAPXVRSPCSDPCRFTGIPVP-PFLPSGKRG 776
            P V+P   P + +P ++P   +  P P PF+ SG  G
Sbjct: 1078 PQVTPATPPALTTPPTEPIS-SATPAPGPFVISGNGG 1113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,623
Number of Sequences: 2352
Number of extensions: 14522
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)