Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C24
         (924 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015621-1|AAH15621.1|  245|Homo sapiens C14orf32 protein protein.     36   0.27 
BC132861-1|AAI32862.1|  276|Homo sapiens hypothetical protein LO...    31   5.9  
BC126240-1|AAI26241.1|  276|Homo sapiens hypothetical protein LO...    31   5.9  
AK123670-1|BAC85673.1|  276|Homo sapiens protein ( Homo sapiens ...    31   5.9  
D66904-1|BAA11029.1|  360|Homo sapiens suppressor for yeast muta...    31   7.8  

>BC015621-1|AAH15621.1|  245|Homo sapiens C14orf32 protein protein.
          Length = 245

 Score = 35.5 bits (78), Expect = 0.27
 Identities = 26/80 (32%), Positives = 33/80 (41%)
 Frame = +3

Query: 669 PGVSPWKAPXVRSPCSDPCRFTGIPVPPFLPSGKRGAFPIXPRLXGISXXVXVVRPXPGL 848
           PG +PW  P   +P S P   +G+P     PS      P  P   G+   V    P PG 
Sbjct: 35  PGSNPWNNPS--APSSVP---SGLP-----PSATPSTVPFGPAPTGMYPSVPPTGPPPGP 84

Query: 849 GAXTPRSXXTGXPLSGXYPS 908
            A  P S  +  P  G YP+
Sbjct: 85  PAPFPPSGPSCPPPGGPYPA 104


>BC132861-1|AAI32862.1|  276|Homo sapiens hypothetical protein
           LOC339524 protein.
          Length = 276

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
 Frame = +2

Query: 590 GSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSX------GALSXFRPXPLYRNTCSX 751
           G A L    +   +VRG    Q  +  R FPL S        G +S + P P+       
Sbjct: 119 GPAVLHPWRRAGGRVRGASPPQGPQTARGFPLPSRWSSSPIPGCISIY-PSPISFAHPGS 177

Query: 752 LSPFGKAWRXPHXPTPXRYLXSGVXR--SPQXW 844
           L+P G  +  P  P+  R L  G+ R  +P  W
Sbjct: 178 LAPLGSPFPSPGPPSRSRLLCPGLRRGLTPGRW 210


>BC126240-1|AAI26241.1|  276|Homo sapiens hypothetical protein
           LOC339524 protein.
          Length = 276

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
 Frame = +2

Query: 590 GSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSX------GALSXFRPXPLYRNTCSX 751
           G A L    +   +VRG    Q  +  R FPL S        G +S + P P+       
Sbjct: 119 GPAVLHPWRRAGGRVRGASPPQGPQTARGFPLPSRWSSSPIPGCISIY-PSPISFAHPGS 177

Query: 752 LSPFGKAWRXPHXPTPXRYLXSGVXR--SPQXW 844
           L+P G  +  P  P+  R L  G+ R  +P  W
Sbjct: 178 LAPLGSPFPSPGPPSRSRLLCPGLRRGLTPGRW 210


>AK123670-1|BAC85673.1|  276|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41676 fis, clone HCASM2002502. ).
          Length = 276

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
 Frame = +2

Query: 590 GSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSX------GALSXFRPXPLYRNTCSX 751
           G A L    +   +VRG    Q  +  R FPL S        G +S + P P+       
Sbjct: 119 GPAVLHPWRRAGGRVRGASPPQGPQTARGFPLPSRWSSSPIPGCISIY-PSPISFAHPGS 177

Query: 752 LSPFGKAWRXPHXPTPXRYLXSGVXR--SPQXW 844
           L+P G  +  P  P+  R L  G+ R  +P  W
Sbjct: 178 LAPLGSPFPSPGPPSRSRLLCPGLRRGLTPGRW 210


>D66904-1|BAA11029.1|  360|Homo sapiens suppressor for yeast mutant
           protein.
          Length = 360

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +3

Query: 636 EVAKPDRTIKIPGVSPWKAPXVRSPCSDPCRFTGIPVPP 752
           EV  P   +     S W      SPCS PC   G  V P
Sbjct: 138 EVELPVEKVASSSASGWATASSTSPCSTPCSMPGTSVAP 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,414,820
Number of Sequences: 237096
Number of extensions: 2534218
Number of successful extensions: 5357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5276
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)