Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_C23
(910 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.011
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.011
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.018
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.032
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.098
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.17
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 31 0.30
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.30
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.2
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 2.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.8
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 3.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.7
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 27 3.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 6.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = +2
Query: 695 KXQTPXPXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPL---XPXXGPLP 865
+ TP PP P PP +PP P P P PPL P PLP
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 866 PPQNXXPXXSPXP 904
P P +P P
Sbjct: 471 PAA-PAPPPAPAP 482
Score = 35.5 bits (78), Expect = 0.011
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 669 PPPPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPR 776
PPPPPPP + + P G + PPP PPR
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSL--PPPPPPPR 344
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 734 PPKXPSXPPPXSP-PXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXXPXXS 895
PP P P P P S P PP P PP P P P P P S
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVAS 490
Score = 34.7 bits (76), Expect = 0.018
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXP--PPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNX 880
P R P P+ P PP +PP PP PP PPL P PP
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP--SLPMGAPAAPPLPPSAPIAPPLPAG 462
Query: 881 XPXXSPXP 904
P P P
Sbjct: 463 MPAAPPLP 470
Score = 33.5 bits (73), Expect = 0.042
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 704 TPXPXXXRXXPPKXPSXPPPXS-PPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPP 868
TP PP PS PP P S P PPP P PP P P+ P
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPR-PIAP 277
Score = 32.7 bits (71), Expect = 0.074
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 779 SPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQN 877
+PP PP P R P P P+PPP N
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSN 261
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +3
Query: 627 GAQNXPKGPXXXFXPPPPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXAPLXPPQXP 806
G Q P PP PPP + N + P P PP P PP P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +3
Query: 672 PPPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXAPLXPPQXPKXK 815
PPPPPP P + L PPP P A P P+ +
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGR 358
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +3
Query: 630 AQNXPKGPXXXFXPPPPPP---PXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXAPLXPP 797
A + P P PPPPPP P +P P PP P R AP PP
Sbjct: 348 AGSIPLPPQGRSAPPPPPPRSAPSTGRQPP-PLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 746 PSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPP 871
P PPP P S P PP P P P P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +2
Query: 692 KKXQTPXPXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPP 871
KK P P R K P + PP PPP PP P PPP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP--QGRSAPPPPP 365
Query: 872 QNXXPXXSPXP 904
P P
Sbjct: 366 PRSAPSTGRQP 376
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPPP--XPQXXXKXRXPPPLXP-XXGPLPPPQN 877
P P R PP PPP S P + PPP + PPP P P PP
Sbjct: 352 PLPPQGRSAPPP----PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Query: 878 XXPXXSPXP 904
S P
Sbjct: 408 NASRTSTPP 416
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 737 PKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXX-GPLPPPQNXXP 886
P S PP PP P PP PPP+ P G + P N P
Sbjct: 224 PTSTSAPP--IPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +2
Query: 734 PPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPP 871
PP P P PP P PP P P PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.011
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Frame = +2
Query: 734 PPKXPSXPPPXS---PPXSPPXPP--PXPQXXXKXRXPPPLXPXXGPLPPP-QNXXPXXS 895
PP P+ P P S PP S P P P P P P LPPP Q P S
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 896 P 898
P
Sbjct: 184 P 184
Score = 33.1 bits (72), Expect = 0.056
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +3
Query: 621 APGAQNXPKGPXXXFXPPPPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXAPLXPPQ 800
AP + P P PP PP P P P K P PP P P +
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 801 XP 806
P
Sbjct: 183 SP 184
Score = 33.1 bits (72), Expect = 0.056
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = +2
Query: 704 TPXPXXXRXXPPKXPSXPPPXS--PPXSPPXPPPX-PQXXXKXRXPPPLXPXXGPLPPPQ 874
T P PP S PP S PP PPP P K P P P PP+
Sbjct: 141 TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Query: 875 NXXPXXSPXP 904
P S P
Sbjct: 201 VPPPPLSQAP 210
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = +2
Query: 734 PPKXPSXPP--PXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXXP 886
PP PS P P PP PP P P P G P + P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESP 236
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Frame = +3
Query: 651 PXXXFXPPPPP---PPXKXXKPXXP--XXXGXNPQKXLRXPPPXP--PRXAPLXPPQXP 806
P PPP P PP P P P ++ PP P P P PP+ P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 734 PPKXPSXPPPXSPPXSPPXPPPXP-QXXXKXRXPPPLXPXXGPLPPP 871
PP P+ P P P PPP P PPP GP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +2
Query: 692 KKXQTPXPXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPP 871
K P P P P PP +P P PPP P PPP P PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP------PPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 669 PPPPPPPXKXXKPXXPXXXGXNPQKXL--RXPPPXPPRXAPLXPPQXP 806
PPPPPP P P + PPP PP A PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Frame = +1
Query: 745 PFXTPPXFPPXKPPXXPPXPPXXX----EXPXPPPPXPXXG 855
P PP P P PP PP P PPPP G
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPP 838
P P PP P PP PP PP + P P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 618 GAPGAQNXPKGPXXXFXPPPPPPP 689
G P P G PPPPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 669 PPPPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXA 782
P PPP P P P G PPP PP A
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGV---AGAGPPPPPPPPPA 784
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 642 PKGPXXXFXPPPPPPP 689
P P PPPPPPP
Sbjct: 753 PPAPIMGGPPPPPPPP 768
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPPP----XPQXXXKXRXPPPLXPXXG--PLPP 868
P P P + PP +P +PP P P P PP P G P+PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 869 PQNXXPXXSP 898
P P P
Sbjct: 1194 PSEAPPVPKP 1203
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +2
Query: 707 PXPXXXRXXPP-KXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXX 883
P P PP P+ P PP S P P P PP P P+P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP---PVPTPSAGL 1226
Query: 884 P 886
P
Sbjct: 1227 P 1227
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 704 TPXPXXXRXXPPKXPSXPPPXSPPXSP-PXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNX 880
+P + PP P P + P +P PP P+ K P P+P P
Sbjct: 981 SPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTA 1040
Query: 881 XPXXSP 898
P P
Sbjct: 1041 PPVPIP 1046
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXXP 886
P P P + P P S +P PPP P + P P+P P P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEI-PSIPAPSGAPPVPAPSGIPP 1093
Query: 887 XXSP 898
P
Sbjct: 1094 VPKP 1097
Score = 29.1 bits (62), Expect = 0.91
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +2
Query: 707 PXPXXXRXXPP-KXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXX 883
P P PP PS PP P P P P P P P+P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP---PVPAPSGAP 1159
Query: 884 PXXSP 898
P P
Sbjct: 1160 PVPKP 1164
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 749 SXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXXP 886
S P P +PP PP P PP P PL P + P
Sbjct: 959 SGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP 1004
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXG--PLPPPQNX 880
P P P P P P S S P P P PP P P+P P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVA 1110
Query: 881 XP 886
P
Sbjct: 1111 VP 1112
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPPP---XPQXXXKXRXPPPLXPXXG--PLPPP 871
P P P + PP P +PP P P P PP P P+P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 872 QNXXP 886
+ P
Sbjct: 1175 SSGIP 1179
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 642 PKGPXXXFXPPPPPPPXKXXKPXXPXXXGXN-PQKXLRXPPPXPPRXAPLXP 794
P P PP P P P P P+ + PP PP AP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 675 PPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXAPLXPPQXPKXK 815
PP PP P G P PP P A L P P K
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 704 TPXPXXXRXXP-PKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNX 880
+P R P PK S PP P + P P P P P+ P+P +
Sbjct: 1003 SPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVP----STAPPVPIPTSTPPVPKSSSG 1058
Query: 881 XPXXSP 898
P P
Sbjct: 1059 APSAPP 1064
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/61 (24%), Positives = 16/61 (26%)
Frame = +3
Query: 624 PGAQNXPKGPXXXFXPPPPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXAPLXPPQX 803
P P P PP P P P G P PP P + P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 804 P 806
P
Sbjct: 1213 P 1213
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/70 (25%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPPP----XPQXXXKXRXPPPLXPXXGPLPPPQ 874
P P P PP +P PP P P P PP P P P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 875 NXXPXXSPXP 904
+ P P
Sbjct: 1127 SVAAPPVPVP 1136
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +2
Query: 746 PSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXG--PLPPPQNXXP 886
P PPP P P P PP P G P+P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.018
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXG-GGXEGXFGGXXLXXLGXG 706
G GG G GGG GG GG G GG G FGG L G G
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG-GLGGFGGG 257
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXG-GGXEGXFGG 733
G GG G GGG GG GG G GG G GG
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGX-GGGXGGLXGGEXGGGXEG 745
G GGG F G GGG GG GG G G G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 804 GXGGGXGGLXGGEXGGGXEGXFGG 733
G GGG GG G G G G FGG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGG 215
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXGGGXEGXFGG 733
G GGG G GG GG G G G FGG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGG 228
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 770 PPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXXPXXS 895
PP +PP PPP P + PPP P G + +N P S
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP--PPPGYVKKRKNKTPAQS 44
Score = 32.3 bits (70), Expect = 0.098
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 734 PPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPP 838
PP P PPP P S P PPP P K + P
Sbjct: 9 PPPPP--PPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +3
Query: 618 GAPGAQNXPKGPXXXFXPPPPPPP--XKXXKPXXPXXXGXNPQKXL 749
G P P G PPPPPPP K K P G N +K L
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSG-NLEKQL 51
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.098
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 704 TPXPXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXP 847
TP PP+ + PP P PP P P PPP P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 32.3 bits (70), Expect = 0.098
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXP-SXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPP 868
P PP P S PPP S P P PP P PPPL P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP--------PPPLPASSAPSVP 1744
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 758 PPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXXPXXSPXP 904
P +PP P P PQ PPP+ P PP P +P P
Sbjct: 1686 PVSTPPVRPQSAAP-PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 624 PGAQNXPKGPXXXFXPPPPPPPXKXXKPXXPXXXGXNPQKXLRXPPPXPPRXAPLXP 794
P + P P PPPPP P P PPP P AP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS--APPPPLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Frame = +1
Query: 727 GXTPKXPFXTPP-----XFPPXKPPXXPPXPPXXXEXPXPPPPXP 846
G P P TPP PP PP PP P PP P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +2
Query: 737 PKXPSXPPPXSP-PXSP-----PXPPPXPQXXXKXRXPPPLXPXXGPLPPP 871
P P PP P +P P PPP P PP+ PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 707 PXPXXXRXXPPKXPSXPPPXSPPXSPPXPP 796
P P P PS PPP P S P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXGGGXEGXFGG 733
G RGG G GG GG GG GGG G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXGG--GXEGXFGG 733
G RGG G GGG GG GG GG G G GG
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXG--GGXEGXFGG 733
G RGGG G GG GG GG G GG G GG
Sbjct: 34 GARGGGR---GGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +2
Query: 746 PSXPPPXSPPXSP--PXPPPXPQXXXKXRXPPPLXPXXGPLPPPQNXXPXXSP 898
P P P SPP + P P P Q + L P P PQ+ P SP
Sbjct: 459 PMFPAPFSPPRNAMMPIPAPMDQFSTFHQSMATLPPGAVPTSIPQSYYPIYSP 511
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 840 RGGGXRXFXXXWGXGGGXGGLXGGEXGGGXEGXFGG 733
RGG G GG GG G GGG G FGG
Sbjct: 137 RGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGG 172
Score = 29.1 bits (62), Expect = 0.91
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 804 GXGGGXGGLXGGEXGGGXEGXFGGXXLXXLGXG 706
G GG GG GG GG G FGG G G
Sbjct: 142 GFRGGRGGSRGG-FGGNSRGGFGGGSRGGFGGG 173
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXGG 757
G GGG R GG GG GG GG
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 846 GXRGGGXRXFXXXWGXGGGXGGLXGGEXGGGXEGXFGG 733
G GG R GG GG GG GG G GG
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P P + PP P PPP + PPP+ G +PPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P P + PP P PPP + PPP+ G +PPP
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P P + PP P PPP + PPP+ G +PPP
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P P + PP P PPP + PPP+ G +PPP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P P + PP P PPP + PPP+ G +PPP
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P P + PP P PPP + PPP+ G +PPP
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 713 PXXXRXXPPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P P + PP P PPP + PPP+ G +PPP
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 734 PPKXPSXPPPXSPPXSPPXPPPXPQXXXKXRXPPPLXPXXGP-LPPP 871
P + PP P PPP + PPP+ G +PPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 672 PPPPPPXKXXKPXXPXXXGXNPQKXLRXPP---PXPPRXAPLXPPQXP 806
PPPPPP + P + PP P PP A PQ P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Frame = +2
Query: 695 KXQTPXPXXXRXXPPKXPSXPPPXS------PPXSPPXPP 796
K Q P P + PP S PP PP P PP
Sbjct: 203 KAQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPP 242
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.6 bits (51), Expect(2) = 2.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 663 FXPPPPPPP 689
+ PPPPPPP
Sbjct: 368 YSPPPPPPP 376
Score = 21.4 bits (43), Expect(2) = 2.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 669 PPPPPPPXKXXKP 707
PPPPPP P
Sbjct: 372 PPPPPPELLNHSP 384
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 736 PKXPFXTPPXFPPXKPPXXPPXPPXXXEXPXPPPPXP 846
P PP F P P P PPPP P
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +2
Query: 701 QTPXPXXXRXXPPKXPSXPPPXSPPXSPPXPP 796
Q P P + PPP + P PP PP
Sbjct: 255 QLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +2
Query: 758 PPXSPPXSPPXPPPXPQXXXKXR-XPPPLXPXXGPLPPP 871
P P +P P P P K PPP+ P PP
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 798 GGGXGGLXGGEXGGGXEGXFGG 733
GGG GG G GG G FGG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 804 GXGGGXGGLXGGEXGGGXEGXFGG 733
G GG GG GG G G G FGG
Sbjct: 448 GSRGGRGGF-GGRGGFGGRGGFGG 470
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 733 TPKXPFXTPPXFPPXKP 783
T K PF PP +PP KP
Sbjct: 38 TFKYPFFIPPPYPPAKP 54
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +2
Query: 737 PKXPSXPPPXSP-PXSPPXP-PPXPQXXXKXRXPPPLXP 847
P P+ P P P P PP P P P+ P P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 621 APGAQNXPKGPXXXFXPPPPPPPXKXXK 704
AP A N K PPPPPPP + K
Sbjct: 1082 APVANNVSK--PSAVPPPPPPPPAEVEK 1107
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 648 GPXXXFXPPPPPPP 689
G F PPPPPPP
Sbjct: 939 GVMPAFPPPPPPPP 952
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.142 0.483
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,172,419
Number of Sequences: 5004
Number of extensions: 18326
Number of successful extensions: 605
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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