Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C22
         (897 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.58 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   2.1  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   7.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -1

Query: 564 PXGGGKPXPPPXXPGAXXFXGGGGXGGXKKXPXXPGGGG 448
           P  GG+P  P   P +    GGG   G K     P GGG
Sbjct: 495 PPPGGRPNAP--NPSSAVTPGGGRAEGDKVTFQIPNGGG 531



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = -3

Query: 565 PPXGGXTPXPPPXXXGXGFXGGGXGXGXKKKXPXPXGGG 449
           PP GG    P P        GGG   G K     P GGG
Sbjct: 495 PPPGGRPNAPNP--SSAVTPGGGRAEGDKVTFQIPNGGG 531


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect(2) = 2.1
 Identities = 11/36 (30%), Positives = 12/36 (33%)
 Frame = +3

Query: 486 PXPXPPPKXPXPXXXGGGXGVXPPXGGXXXFPXXRG 593
           P P PPP    P     G  +  P G     P   G
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLG 618



 Score = 20.6 bits (41), Expect(2) = 2.1
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +3

Query: 450 PPPXGXGXFFXXPXPXPPP 506
           PPP G       P   PPP
Sbjct: 533 PPPPGGAVLNIPPQFLPPP 551


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = -1

Query: 558 GGGKPXPPPXXPGAXXFXGGGGXGGXKKXPXXPG 457
           G   P  PP  PG     G  G  G K     PG
Sbjct: 66  GNSGPVGPPGAPGRDGMPGAPGLPGSKGVKGDPG 99


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
 Frame = -1

Query: 525 PGAXXFXGGGGX---GGXKKXPXXPGGGG 448
           PGA     GGG    GG       PGGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
 Frame = -3

Query: 532 PXXXGXGFXGGGXGXGXKKKX-PXPXGGG 449
           P   G G  GG  G G      P P GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 558 GGGKPXPPPXXPGAXXFXGGGGXGG 484
           GGG P       G     GGGG GG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 23.4 bits (48), Expect = 9.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 518 APGXXGGGXGXPPPXG 565
           APG  GG  G P P G
Sbjct: 211 APGGGGGSSGGPGPGG 226


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = +1

Query: 508  KXPGPXXXGGGXGFXPP---XGGXXXSPKXGGNT 600
            K PGP   GGG G  P      G   +   GGN+
Sbjct: 1414 KPPGPEGVGGGGGKSPSDKHNPGTLGTDSRGGNS 1447


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,142
Number of Sequences: 2352
Number of extensions: 11933
Number of successful extensions: 56
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)