Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_C21
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protei... 102 2e-21
BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protei... 102 2e-21
BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protei... 102 2e-21
AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3 pr... 102 2e-21
X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein. 92 2e-18
M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein ... 92 2e-18
CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein. 92 2e-18
BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protei... 92 2e-18
BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protei... 92 2e-18
BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein. 92 2e-18
BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protei... 92 2e-18
AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protei... 92 2e-18
AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protei... 92 3e-18
M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID ... 90 9e-18
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 30 9.8
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 30 9.8
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 30 9.8
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 30 9.8
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 30 9.8
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 30 9.8
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 30 9.8
BC004258-1|AAH04258.2| 649|Homo sapiens WW domain containing ad... 30 9.8
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 30 9.8
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 9.8
AL358234-3|CAH70768.1| 602|Homo sapiens WW domain containing ad... 30 9.8
AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing ad... 30 9.8
AL358234-1|CAH70766.1| 647|Homo sapiens WW domain containing ad... 30 9.8
AL161936-4|CAI40924.1| 602|Homo sapiens WW domain containing ad... 30 9.8
AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing ad... 30 9.8
AL161936-2|CAI40922.1| 647|Homo sapiens WW domain containing ad... 30 9.8
AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing ad... 30 9.8
AK223600-1|BAD97320.1| 647|Homo sapiens WW domain-containing ad... 30 9.8
AK055852-1|BAB71029.1| 602|Homo sapiens protein ( Homo sapiens ... 30 9.8
AB058747-1|BAB47473.1| 367|Homo sapiens KIAA1844 protein protein. 30 9.8
>DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 102 bits (245), Expect = 2e-21
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = +1
Query: 625 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 804
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 805 L*EXGTENXS--LISHLVNGCTGAK 873
+ + + S CTGAK
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAK 262
>BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 102 bits (245), Expect = 2e-21
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = +1
Query: 625 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 804
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 805 L*EXGTENXS--LISHLVNGCTGAK 873
+ + + S CTGAK
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAK 262
>BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 102 bits (245), Expect = 2e-21
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = +1
Query: 625 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 804
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 805 L*EXGTENXS--LISHLVNGCTGAK 873
+ + + S CTGAK
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAK 262
>AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3
protein.
Length = 375
Score = 102 bits (245), Expect = 2e-21
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = +1
Query: 625 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 804
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 805 L*EXGTENXS--LISHLVNGCTGAK 873
+ + + S CTGAK
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAK 262
>X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein.
Length = 335
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 144 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 203
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 204 RTTALIFSSGKMVCTGAK 221
>M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein
protein.
Length = 339
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 208 RTTALIFSSGKMVCTGAK 225
>CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein.
Length = 339
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 208 RTTALIFSSGKMVCTGAK 225
>BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protein
protein.
Length = 336
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 145 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 204
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 205 RTTALIFSSGKMVCTGAK 222
>BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 147 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 206
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 207 RTTALIFSSGKMVCTGAK 224
>BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein.
Length = 288
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 97 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 156
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 157 RTTALIFSSGKMVCTGAK 174
>BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 147 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 206
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 207 RTTALIFSSGKMVCTGAK 224
>AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protein
protein.
Length = 339
Score = 92.3 bits (219), Expect = 2e-18
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 208 RTTALIFSSGKMVCTGAK 225
>AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protein
protein.
Length = 208
Score = 91.9 bits (218), Expect = 3e-18
Identities = 43/54 (79%), Positives = 46/54 (85%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL 807
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAV+
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVI 201
>M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID
protein.
Length = 339
Score = 90.2 bits (214), Expect = 9e-18
Identities = 48/78 (61%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL RNAEYNPKRFAAV+
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRRRNAEYNPKRFAAVIMRIREP 207
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 208 RTTALIFSSGKMVCTGAK 225
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>BC004258-1|AAH04258.2| 649|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 649
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 9.8
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +3
Query: 597 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 776
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 777 V*SQTFCRC 803
V T C C
Sbjct: 119 VDRDTVCGC 127
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 30.3 bits (65), Expect = 9.8
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLK 747
SPAP TP+TPL G P +++S+V L D++
Sbjct: 331 SPAPTTPVTPL----GTTPPSSDVISSVELPLDADVQ 363
>AL358234-3|CAH70768.1| 602|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 602
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 198 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 238
>AL358234-1|CAH70766.1| 647|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 647
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL161936-4|CAI40924.1| 602|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 602
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 198 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 238
>AL161936-2|CAI40922.1| 647|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 647
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 389
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 88 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 128
>AK223600-1|BAD97320.1| 647|Homo sapiens WW domain-containing
adapter with a coiled-coil region isoform 1 variant
protein.
Length = 647
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AK055852-1|BAB71029.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ31290 fis, clone KIDNE2007352, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 602
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AB058747-1|BAB47473.1| 367|Homo sapiens KIAA1844 protein protein.
Length = 367
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 753
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 278 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 318
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,484,540
Number of Sequences: 237096
Number of extensions: 1862969
Number of successful extensions: 5007
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5003
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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