Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_C21
(891 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box bindi... 106 4e-23
U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box bindi... 105 1e-22
M38388-1|AAA28926.1| 353|Drosophila melanogaster TATA-consensus... 105 1e-22
M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box bindi... 105 1e-22
AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p pro... 105 1e-22
AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA... 105 1e-22
X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related fa... 51 2e-06
X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related fa... 51 2e-06
AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p pro... 51 2e-06
AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA... 51 2e-06
AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger re... 33 0.70
AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p pro... 30 3.7
AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-P... 30 3.7
AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-P... 30 3.7
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P... 30 3.7
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 29 8.6
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 29 8.6
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 29 8.6
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 29 8.6
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 29 8.6
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 29 8.6
>U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box binding
protein protein.
Length = 354
Score = 106 bits (255), Expect = 4e-23
Identities = 58/94 (61%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Frame = +1
Query: 598 AGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAE 777
AG+ S + PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAE
Sbjct: 147 AGDALSNIHQTMGPSTPMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 206
Query: 778 YNPKRFAAVL*EXGTENXS--LISHLVNGCTGAK 873
YNPKRFAAV+ + + S CTGAK
Sbjct: 207 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 240
Score = 35.5 bits (78), Expect = 0.099
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 298 MDHMLPSPYNIPGIGTPLHQPEED 369
MD ML ++IP IGTPLHQ E D
Sbjct: 1 MDQMLSPNFSIPSIGTPLHQMEAD 24
>U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 105 bits (251), Expect = 1e-22
Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAV+
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 222 RTTALIFSSGKMVCTGAK 239
Score = 35.5 bits (78), Expect = 0.099
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 298 MDHMLPSPYNIPGIGTPLHQPEED 369
MD ML ++IP IGTPLHQ E D
Sbjct: 1 MDQMLSPNFSIPSIGTPLHQMEAD 24
>M38388-1|AAA28926.1| 353|Drosophila melanogaster
TATA-consensus-binding transcriptionfactor TFII protein.
Length = 353
Score = 105 bits (251), Expect = 1e-22
Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAV+
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 222 RTTALIFSSGKMVCTGAK 239
Score = 35.5 bits (78), Expect = 0.099
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 298 MDHMLPSPYNIPGIGTPLHQPEED 369
MD ML ++IP IGTPLHQ E D
Sbjct: 1 MDQMLSPNFSIPSIGTPLHQMEAD 24
>M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 105 bits (251), Expect = 1e-22
Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAV+
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 222 RTTALIFSSGKMVCTGAK 239
Score = 35.5 bits (78), Expect = 0.099
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 298 MDHMLPSPYNIPGIGTPLHQPEED 369
MD ML ++IP IGTPLHQ E D
Sbjct: 1 MDQMLSPNFSIPSIGTPLHQMEAD 24
>AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p
protein.
Length = 353
Score = 105 bits (251), Expect = 1e-22
Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAV+
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 222 RTTALIFSSGKMVCTGAK 239
Score = 35.5 bits (78), Expect = 0.099
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 298 MDHMLPSPYNIPGIGTPLHQPEED 369
MD ML ++IP IGTPLHQ E D
Sbjct: 1 MDQMLSPNFSIPSIGTPLHQMEAD 24
>AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA
protein.
Length = 353
Score = 105 bits (251), Expect = 1e-22
Identities = 55/78 (70%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +1
Query: 646 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVL*EXGTE 825
PMTP TP SADPGI+PQLQNIVSTVNL CKLDLKKIALHARNAEYNPKRFAAV+
Sbjct: 162 PMTPATPGSADPGIVPQLQNIVSTVNLCCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 221
Query: 826 NXS--LISHLVNGCTGAK 873
+ + S CTGAK
Sbjct: 222 RTTALIFSSGKMVCTGAK 239
Score = 35.5 bits (78), Expect = 0.099
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 298 MDHMLPSPYNIPGIGTPLHQPEED 369
MD ML ++IP IGTPLHQ E D
Sbjct: 1 MDQMLSPNFSIPSIGTPLHQMEAD 24
>X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 774
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 775 EYNPKRFAAVL 807
EY+PKRF V+
Sbjct: 77 EYSPKRFRGVI 87
>X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 774
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 775 EYNPKRFAAVL 807
EY+PKRF V+
Sbjct: 77 EYSPKRFRGVI 87
>AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p
protein.
Length = 224
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 774
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 775 EYNPKRFAAVL 807
EY+PKRF V+
Sbjct: 77 EYSPKRFRGVI 87
>AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA
protein.
Length = 224
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNA 774
A N ++ + P+ + P A I +LQNIV+T +++C+LDLK I RN+
Sbjct: 19 ATSNAAANPHAALQPQQPVALVEPKDAQHEI--RLQNIVATFSVNCELDLKAINSRTRNS 76
Query: 775 EYNPKRFAAVL 807
EY+PKRF V+
Sbjct: 77 EYSPKRFRGVI 87
>AY864367-1|AAX38005.1| 574|Drosophila melanogaster scavenger
receptor protein.
Length = 574
Score = 32.7 bits (71), Expect = 0.70
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 504 YAHICTNSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS*SCPNDSSDTTLCRPW 683
Y CT L + D ++ T S + RKS +T + + +S TT RP
Sbjct: 320 YLEECTKELLTTTEDDISSVPPTVTSTSTSTTRKSTTTTTTTTTTTTTTSTSTTTTKRPT 379
Query: 684 NFTTVTK 704
TT TK
Sbjct: 380 TTTTTTK 386
>AY118689-1|AAM50549.1| 893|Drosophila melanogaster AT15637p
protein.
Length = 893
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 696
AA SSQQ + S A TP P+S PG L Q
Sbjct: 283 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 316
>AE013599-3102|AAM68188.1| 889|Drosophila melanogaster CG10543-PB,
isoform B protein.
Length = 889
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 696
AA SSQQ + S A TP P+S PG L Q
Sbjct: 283 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 316
>AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-PC,
isoform C protein.
Length = 1024
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 696
AA SSQQ + S A TP P+S PG L Q
Sbjct: 418 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 451
>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
isoform A protein.
Length = 1634
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 595 AAGNLSSQQMLSQASPAPMTPLTPLSADPGILPQ 696
AA SSQQ + S A TP P+S PG L Q
Sbjct: 1028 AAAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQ 1061
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 697 LQNIVSTVNLDCKLDLKKIALHARNAEY 780
+ N+V + ++ C L L++IAL N EY
Sbjct: 1287 INNVVCSFSVGCHLKLREIALQGSNVEY 1314
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 697 LQNIVSTVNLDCKLDLKKIALHARNAEY 780
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 697 LQNIVSTVNLDCKLDLKKIALHARNAEY 780
+ N+V + ++ C L L++IAL N EY
Sbjct: 109 INNVVCSFSVGCHLKLREIALQGSNVEY 136
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 697 LQNIVSTVNLDCKLDLKKIALHARNAEY 780
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 697 LQNIVSTVNLDCKLDLKKIALHARNAEY 780
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 697 LQNIVSTVNLDCKLDLKKIALHARNAEY 780
+ N+V + ++ C L L++IAL N EY
Sbjct: 204 INNVVCSFSVGCHLKLREIALQGSNVEY 231
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,734,074
Number of Sequences: 53049
Number of extensions: 605194
Number of successful extensions: 2163
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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