BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_C21
(891 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 26 0.40
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 26 0.40
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 26 0.40
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 26 0.40
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.70
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.70
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.70
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.70
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 1.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 1.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 1.6
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 24 2.1
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.8
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 3.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 3.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 8.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 8.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 8.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 8.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 8.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 8.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 8.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 8.6
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.40
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 105 KKLYYNINYIEQIPIPVPVYYGNFPPR 131
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.40
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 110 KKLYYNINYIEQIPIPVPVYYGNFPPR 136
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.40
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 110 KKLYYNINYIEQIPIPVPVYYGNFPPR 136
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.40
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 110 KKLYYNINYIEQIPIPVPVYYGNFPPR 136
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.70
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 106 KKLYYNINYIEQIPIPVPVYYGNFLPR 132
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.70
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 106 KKLYYNINYIEQIPIPVPVYYGNFLPR 132
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.70
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 106 KKLYYNINYIEQIPIPVPVYYGNFLPR 132
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.70
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+YY N PR
Sbjct: 106 KKLYYNINYIEQIPIPVPVYYGNFLPR 132
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 571 VEFEAASSVAELHSWL 524
+EF+ +SV ELHSW+
Sbjct: 80 MEFDDWTSVMELHSWM 95
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y ++ + IP +P+Y N PR
Sbjct: 334 KKLYYNIINIEQIPVPVPVYCGNFPPR 360
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
R+L+Y + + IP +P+Y N PR
Sbjct: 105 RKLYYNINYIEQIPIPVPIYCGNFPPR 131
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 676 DPGILPQLQNIVSTVNLD 729
+P I+P++QN T N D
Sbjct: 640 EPPIMPRVQNATDTTNFD 657
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 752 LHYMLVMLSIIPNVLPLYYENXEPR 826
L+Y ++ + IP +P+Y N PR
Sbjct: 334 LYYNIINIEQIPVPVPIYCGNFPPR 358
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+Y N PR
Sbjct: 105 KKLYYNINYIEQIPIPVPIYCGNFPPR 131
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 746 RRLHYMLVMLSIIPNVLPLYYENXEPR 826
++L+Y + + IP +P+Y N PR
Sbjct: 105 KKLYYNINYIEQIPIPVPIYCGNFPPR 131
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 784 PKRFAAVL*EXGTENXSLISHLVNGCTG 867
P FA + GT N + HL+ C G
Sbjct: 161 PVHFALRIYRNGTVNYLMRRHLILSCQG 188
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 784 PKRFAAVL*EXGTENXSLISHLVNGCTG 867
P FA + GT N + HL+ C G
Sbjct: 161 PVHFALRIYRNGTVNYLMRRHLILSCQG 188
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 784 PKRFAAVL*EXGTENXSLISHLVNGCTG 867
P FA + GT N + HL+ C G
Sbjct: 212 PVHFALRIYRNGTVNYLMRRHLILSCQG 239
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 784 PKRFAAVL*EXGTENXSLISHLVNGCTG 867
P FA + GT N + HL+ C G
Sbjct: 161 PVHFALRIYRNGTVNYLMRRHLILSCQG 188
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 108 KLYYNINYIEQIPIPVPVYCGNFPPR 133
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 341 KLYYNINYIEQIPIPVPVYCGNFPPR 366
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 749 RLHYMLVMLSIIPNVLPLYYENXEPR 826
+L+Y + + IP +P+Y N PR
Sbjct: 341 KLYYNINYIEQIPIPVPVYCGNFPPR 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,508
Number of Sequences: 438
Number of extensions: 3578
Number of successful extensions: 37
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -