Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_C11
(854 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15E1.08 |||NatA N-acetyltransferase complex subunit Ard1 |Sc... 210 1e-55
SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subuni... 73 5e-14
SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subuni... 63 6e-11
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 29 0.84
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 27 4.5
SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po... 26 7.8
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 26 7.8
SPAC869.04 |||formamidase-like protein|Schizosaccharomyces pombe... 26 7.8
>SPAC15E1.08 |||NatA N-acetyltransferase complex subunit Ard1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 177
Score = 210 bits (514), Expect = 1e-55
Identities = 101/158 (63%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
Frame = +3
Query: 294 MNIRCARPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKM 473
M+IR AR SDL MQ+CNL LPENYQ+KYY YH +SWP LSYVA D KG +VGYVLAKM
Sbjct: 1 MDIRPARISDLTGMQNCNLHNLPENYQLKYYLYHAISWPMLSYVATDPKGRVVGYVLAKM 60
Query: 474 EEDGEDN-RHGHITSLAVKRSHRRLGLAQKLMNQASLAMVECFQAKYVSLHVRKSNRAAL 650
EE+ +D HGHITS++V RS+R LGLA++LM Q+ AMVE + AKY+SLHVRKSNRAA+
Sbjct: 61 EEEPKDGIPHGHITSVSVMRSYRHLGLAKRLMVQSQRAMVEVYGAKYMSLHVRKSNRAAI 120
Query: 651 NLYTNSLGFKILEIEPKYYADGEDAYSMMRDLSAFAVD 764
+LY ++L F + IE KYYADGEDAY+M +D S D
Sbjct: 121 HLYRDTLQFDVQGIESKYYADGEDAYAMHKDFSTLKFD 158
>SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subunit
Nat3 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 180
Score = 72.9 bits (171), Expect = 5e-14
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 312 RPSDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDEKGH--IVGYVLAKMEEDG 485
+ +DL + + NL L E + + +Y + WP L V E + ++GY++ K E G
Sbjct: 8 KATDLFSFNNINLDPLTETFNISFYLSYLNKWPSLCVVQESDLSDPTLMGYIMGKSEGTG 67
Query: 486 EDNRHGHITSLAVKRSHRRLGLAQKLMNQASLAMVECFQAKYVSLHVRKSNRAALNLYTN 665
++ H H+T++ V + RRLGLA+ +M+ + A +V L VR SN A++ Y
Sbjct: 68 KE-WHTHVTAITVAPNSRRLGLARTMMDYLE-TVGNSENAFFVDLFVRASNALAIDFY-K 124
Query: 666 SLGFKILEIEPKYYAD----GEDAYSMMRDLS 749
LG+ + YY++ ED++ M + LS
Sbjct: 125 GLGYSVYRRVIGYYSNPHGKDEDSFDMRKPLS 156
>SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 150
Score = 62.9 bits (146), Expect = 6e-11
Identities = 41/124 (33%), Positives = 62/124 (50%)
Frame = +3
Query: 357 LPENYQMKYYFYHGLSWPQLSYVAEDEKGHIVGYVLAKMEEDGEDNRHGHITSLAVKRSH 536
L E Y Y Y WP+ S+VA D +G V+ K + G+I LA+ + +
Sbjct: 23 LSEPYSKYVYRYFVHQWPEFSFVALDND-RFIGAVICKQDVHRGTTLRGYIAMLAIVKEY 81
Query: 537 RRLGLAQKLMNQASLAMVECFQAKYVSLHVRKSNRAALNLYTNSLGFKILEIEPKYYADG 716
R G+A KL QASL +++ A+ + L N AA++ Y LGF + +YY +G
Sbjct: 82 RGQGIATKL-TQASLDVMKNRGAQEIVLETEVDNEAAMSFY-ERLGFCRYKRLYRYYLNG 139
Query: 717 EDAY 728
DA+
Sbjct: 140 TDAF 143
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 29.1 bits (62), Expect = 0.84
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +3
Query: 417 SYVAEDEKGHIVGY---VLAKMEEDGEDNRHGHITSLAVKRSHRRLGLA-QKLMNQASLA 584
++V E + IVG E+D +D+ HG H R G+A Q++ N S
Sbjct: 558 AFVEEKNRYLIVGTSTSAFTSNEDDDDDDGHG----------HNRFGVAFQEVANMTSAT 607
Query: 585 M-VECFQAKYVSLHVRKSNRAALNLYTNSLGFKIL 686
+ ++CF+A + + ++ L ++ SL FK L
Sbjct: 608 LQMDCFEASVI-----ECQKSDLGVFLESLSFKTL 637
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 411 GAKKVHGRSNISSDSSLADTISC 343
G K VHG N++S +++D + C
Sbjct: 577 GGKAVHGLVNLASSRNVSDRVKC 599
>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -1
Query: 506 VTMTIILTVLFHFCQNISNNMS 441
+ +I+LT+LF+F N+S+ M+
Sbjct: 278 IPFSIVLTILFYFDHNVSSVMA 299
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 222 TYHLVVLEQIEIWINSTSKQCTNFKI*LIGEVHKIKSLEYLL*PNFLKY 76
T H +V + +W+ S S Q T + ++ V K S+E LL P K+
Sbjct: 293 TLHDLVSTRCSVWLTSPSSQRTTKDLEVLNNVLK-DSIEPLLLPTVNKF 340
>SPAC869.04 |||formamidase-like protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 77 YFKKFGYSRYSKDLIL*TSPI 139
YF++FGY+ Y L+L +PI
Sbjct: 343 YFRRFGYNDYQLYLLLSCAPI 363
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,255,765
Number of Sequences: 5004
Number of extensions: 64666
Number of successful extensions: 170
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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