Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C08
         (954 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    30   0.090
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   7.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 30.3 bits (65), Expect = 0.090
 Identities = 34/131 (25%), Positives = 37/131 (28%), Gaps = 2/131 (1%)
 Frame = -3

Query: 952 PPPAXGXTPPPXGXKKXXPPPPPXXGXKXGKXXSXXNXXGGXXXGGXXGGXXXGGXPPVX 773
           PP   G  P P G      P  P       +              G       G  PP+ 
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQ---GMQRPPMMGQPPPIR 267

Query: 772 LKXPRGGXPPPXXGAQXFLNXSXGGGXXXKXPP-XXXPXGXGXPXGXP-GXKXFXXGNPP 599
              P GG P P    Q   N S G       PP    P   G P G P G +      P 
Sbjct: 268 PPNPMGG-PRPQISPQN-SNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPM 325

Query: 598 XXGXTXNPPXG 566
               T  PP G
Sbjct: 326 GDPQTSRPPSG 336



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
 Frame = -2

Query: 791 GXTPGX-FKXPPGGXPPPXXGGPXFFKXXXGGGXPXEKXPPTXPFXGXGPXG-XPGXKKX 618
           G  PG     PPG   PP  G P   +    GG   +      P     P G  PG +  
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPG 243

Query: 617 XPGEPP 600
               PP
Sbjct: 244 MQPRPP 249


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -2

Query: 764 PPGGXPPPXXGGPXFFKXXXGGGXPXEKXPPTXPFXGXGPXGXP 633
           PP   PPP  G P         G P    PP     G G    P
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 17/69 (24%), Positives = 19/69 (27%)
 Frame = +3

Query: 630 PGXPXGXPXPKGXXXGGFFXXXPPPXXXFKKXWAPXXGGGXPPRGXFKXTGGXPPXXXPP 809
           P  P   P P G          PPP    +  + P           F       P   PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPP 586

Query: 810 XXPPFXXPP 836
             PP   PP
Sbjct: 587 PPPPMGPPP 595


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/56 (26%), Positives = 17/56 (30%)
 Frame = +3

Query: 783 GXPPXXXPPXXPPFXXPPXXXXXEXXFPXFXPXXGGGGGXFFXXPXGGGVXPXAGG 950
           G P    PP   P   PP     +   P   P    GGG            P +GG
Sbjct: 108 GGPNHHLPPGASPGLVPPPQQQQQQQAPLGIPSVAHGGGSGAIHASPNAQNPSSGG 163



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 883 GXGGGGXSSXXPXGGG 930
           G GGGG     P GGG
Sbjct: 201 GAGGGGSGGGAPGGGG 216



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 531 GXGXXGGXXGXGPKXXXPPPXGGGG 457
           G G  GG  G G      P  GGGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGG 228


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
 Frame = -2

Query: 839 PGGXXKXGXXRGGXPGGXTPGXFKXPPGGXPPPXXGGPXFFKXXXGG-GXPXEKXPPTXP 663
           P G    G  R G PG   P  ++ P G   P    G    K   G  G    +  P  P
Sbjct: 399 PAGAPGGGEGRPGAPGPKGPRGYEGPQG---PKGMDGFDGEKGERGQMGPKGGQGVPGRP 455

Query: 662 FXGXGPXGXPGXK 624
               GP G PG K
Sbjct: 456 ----GPEGMPGDK 464



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = -2

Query: 698 GXPXEKXPPTXPFXGXGPXGXPGXKKXXPGEPPXXG 591
           G P     P  P    GP G PG  +  PG P   G
Sbjct: 383 GEPGRDGIPGQPGIA-GPAGAPGGGEGRPGAPGPKG 417


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 883 GXGGGGXSSXXPXGGG 930
           G  GGG +S  P GGG
Sbjct: 690 GGSGGGLASGSPYGGG 705


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,102
Number of Sequences: 2352
Number of extensions: 16443
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)