Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_C07
(949 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.032
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.032
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.032
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.17
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 34 0.17
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.69
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.69
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 0.88
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 0.88
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 0.88
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.91
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.91
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.1
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 2.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.1
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.8
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 2.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.8
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 30 2.8
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 30 2.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.7
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 3.7
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 3.7
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 3.7
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 3.7
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 3.7
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 3.7
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.9
U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical pr... 29 4.9
U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical pr... 29 4.9
U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical pr... 29 4.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 6.4
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 6.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.4
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.5
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 24 9.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P PPP G P P P P P PP PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P P S PP P G P PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P G P PP GP P PPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP--PPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P PPP G P P P P P PP PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P P S PP P G P PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P G P PP GP P PPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP--PPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P PPP G P P P P P PP PPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P P S PP P G P PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P G P PP GP P PPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP--PPP 373
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPS----PLPXPXPXXPPNPPP 948
P PPP P+F P P P P P PP PPP
Sbjct: 44 PCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +1
Query: 853 LXPPPXGXPRFXXXXPSPLP-XPXPXXPPN--PPP 948
+ PPP P P PLP P P PP PPP
Sbjct: 25 MGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPP 59
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXXPPNPP 945
P P PR P P+P P P PP PP
Sbjct: 31 PTPMCQPRMPCAAPMPMPMPMPVCPPPPP 59
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P+ PPP P P P P P P PPP
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPP 84
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.69
Identities = 27/109 (24%), Positives = 30/109 (27%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXXX 765
GG GG G G G +G G GGG G
Sbjct: 162 GGSGGQGGWG-GSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGG 220
Query: 764 GXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGGXSXWXXAXXWG 618
GG G + R +G G G GG GG W WG
Sbjct: 221 SQGGSQGGWGNQGGQQGGGRGGQQGPGGWG-GGGRGGGWGGWGRGSRWG 268
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = -1
Query: 949 GGGGSGXLGAXXWGXGRDXXXGTWXXLXGEGXRGXXSRXXXXXXXXXXXXXXXXXXXXXX 770
GGGGSG G G G + G W G G G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGG 117
Query: 769 XXGXGGGXXGETXGNRG 719
G GGG G G RG
Sbjct: 118 GGGRGGGGGGRGGGGRG 134
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 755 GGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGGXSXWXXAXXWG 618
GG GG R W RG G G+ GG GG WG
Sbjct: 37 GGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWG 82
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect(2) = 0.88
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGGFGG G G G G N G GGG G
Sbjct: 21 GGGFGGGNNGGSGFGGG---KNGGTGFGGGNTG 50
Score = 21.0 bits (42), Expect(2) = 0.88
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Frame = -3
Query: 758 GGGXXGGNXRESWXXXVRVSPRG-----XXGXGFXGGXAGG 651
G G GGN S + G G GF GG GG
Sbjct: 51 GSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGFGGGSTGG 91
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect(2) = 0.88
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGGFGG G G G G N G GGG G
Sbjct: 21 GGGFGGGNNGGSGFGGG---KNGGTGFGGGNTG 50
Score = 21.0 bits (42), Expect(2) = 0.88
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Frame = -3
Query: 758 GGGXXGGNXRESWXXXVRVSPRG-----XXGXGFXGGXAGG 651
G G GGN S + G G GF GG GG
Sbjct: 51 GSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGG 91
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.1 bits (62), Expect(2) = 0.88
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGGFGG G G G G N G GGG G
Sbjct: 21 GGGFGGGNNGGSGFGGG---KNGGTGFGGGNTG 50
Score = 21.0 bits (42), Expect(2) = 0.88
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Frame = -3
Query: 758 GGGXXGGNXRESWXXXVRVSPRG-----XXGXGFXGGXAGG 651
G G GGN S + G G GF GG GG
Sbjct: 51 GSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGG 91
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 862 PPXGXPRFXXXXPSPLPXPXPXXPPNPP 945
PP PR+ P P P P PP PP
Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 836 PGXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
PG PP P G PG PP P PPP
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXS-PXXGPXXPRTPPP 949
G PP P P PG PP P GP PPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P P S +PP P PR PPP
Sbjct: 258 GQYPPVPPP----PPSVTPMPPPMPPTPGMTPRPPPP 290
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 862 PPXGXPRFXXXXPSPLPXPXPXXPPNPP 945
PP PR+ P P P P PP PP
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 836 PGXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
PG PP P G PG PP P PPP
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXS-PXXGPXXPRTPPP 949
G PP P P PG PP P GP PPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
G PP P P P S +PP P PR PPP
Sbjct: 268 GQYPPVPPP----PPSVTPMPPPMPPTPGMTPRPPPP 300
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/99 (27%), Positives = 28/99 (28%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXX 768
GGG GG G G G G G GG G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVA 184
Query: 767 XGXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGG 651
GGG GG S V+P G G G G GG
Sbjct: 185 PSGGGGCGGGG--SSGGGGYAVAPSGGGGCGGGGSSGGG 221
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGG GG G G G G G G GGG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/99 (27%), Positives = 28/99 (28%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXX 768
GGG GG G G G G G GG G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVA 184
Query: 767 XGXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGG 651
GGG GG S V+P G G G G GG
Sbjct: 185 PSGGGGCGGGG--SSGGGGYAVAPSGGGGCGGGGSSGGG 221
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGG GG G G G G G G GGG G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGG GG G G G G G G GGG G
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGG 162
Score = 29.5 bits (63), Expect = 3.7
Identities = 27/99 (27%), Positives = 27/99 (27%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXX 768
GGG G G G G G G G GGG G
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGC 133
Query: 767 XGXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGG 651
G GGG GG G G G GG GG
Sbjct: 134 GGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 172
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGG GG G G G G G G GGG G
Sbjct: 66 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 98
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGG 858
GGG GG G G G G G G GGG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGGGG 84
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXG-PXXPRT--PPP 949
G PP P P P + PP P G P PRT PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
PPP G P SP P PP PPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXG-PXXPRT--PPP 949
G PP P P P + PP P G P PRT PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
PPP G P SP P PP PPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 839 GXXPPXPLPXXGXPGSXXXVPPXSPXXG-PXXPRT--PPP 949
G PP P P P + PP P G P PRT PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
PPP G P SP P PP PPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGG 858
GGG GG G G G G G G GGG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGNYGGG 84
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGGFGG G G G G G G GGG G
Sbjct: 63 GGGFGGGNG-GFGGGGGGNYGGGGGNQGGGGGG 94
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPP 945
P PPP P P P P P PP PP
Sbjct: 546 PTPPPPPREPTPREPTPEPEPVREPTPPPPPP 577
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P P PR P+P P P PP P P
Sbjct: 123 PAPPNPPRTCCPPPTPAAPPPPPPPPPPAP 152
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGGFGG G G G G G GGG G
Sbjct: 185 GGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGG 217
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GG FGG G G+G G G G GGG G
Sbjct: 159 GGDFGGYGGGGMGGG-GYGGGGDGGYGGGGFGG 190
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXX--PPNPPP 948
PPP P+ P P P P P PP PPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 848 PPXPLPXXGXPGSXXXVPPXSPXXGPXXPRTPPP 949
PP PLP G+ PP P G P PPP
Sbjct: 564 PPPPLPQ-NLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGFGG G G G G N G GG G
Sbjct: 47 GGFGGGPGSNYGPGRGGFGGNGGFGGNGGFGG 78
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
PPP P P P P P P P P P
Sbjct: 97 PPPPPPPTQPEPEPEPRPEPQPEPQPEPQP 126
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGG 861
GGG GG G G G G G G P GG
Sbjct: 483 GGGGGGFGGGGGGFGGGGGGFGSGSPFGG 511
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 844 HXPLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
H PPP + SP P P P P PPP
Sbjct: 118 HEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPP 152
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 898 PSPLPXPXPXXPPNPPP 948
PSPL P P PP PPP
Sbjct: 783 PSPLTAPIPPPPPPPPP 799
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 898 PSPLPXPXPXXPPNPPP 948
PSPL P P PP PPP
Sbjct: 682 PSPLTAPIPPPPPPPPP 698
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGG 858
GGG GG G G G G G G GGG
Sbjct: 105 GGGCGGGGGGGCGGGGGGGCGGGGGGGGGG 134
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGG GG G G G G G G GGG G
Sbjct: 99 GGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGG 131
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGG GG G G G N G GGG G
Sbjct: 805 GGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNG 837
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGFGG G G G G G GG +G
Sbjct: 222 GGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGFGG G G G G G GG +G
Sbjct: 222 GGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/109 (23%), Positives = 29/109 (26%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXXX 765
GG GG G G G + G P GGG G
Sbjct: 221 GGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQG 279
Query: 764 GXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGGXSXWXXAXXWG 618
G G G GG + W + G G GG G WG
Sbjct: 280 GGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWG 328
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/109 (23%), Positives = 29/109 (26%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXXX 765
GG GG G G G + G P GGG G
Sbjct: 183 GGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQG 241
Query: 764 GXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGGXSXWXXAXXWG 618
G G G GG + W + G G GG G WG
Sbjct: 242 GGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWG 290
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/109 (23%), Positives = 29/109 (26%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXXX 765
GG GG G G G + G P GGG G
Sbjct: 221 GGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQG 279
Query: 764 GXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGGXSXWXXAXXWG 618
G G G GG + W + G G GG G WG
Sbjct: 280 GGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWG 328
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGFGG G G G G G GG +G
Sbjct: 222 GGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNP 942
PL PPP P PSP+P P PP P
Sbjct: 88 PLPPPP--PPASPCCGPSPVPAPCCPPPPAP 116
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P PPP P PSP P PP PPP
Sbjct: 465 PAPPPPSRIPN---PSPSPQPAEVSKSPPPPPP 494
>U49956-7|AAL32232.1| 753|Caenorhabditis elegans Hypothetical
protein M03A1.6b protein.
Length = 753
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 851 PXPLPXXGXPGSXXXVPPXSPXXGPXXPRTP 943
P LP G PGS VPP S GP P P
Sbjct: 12 PSGLPSNGNPGSSTTVPPAS-KSGPVAPPRP 41
>U49956-6|ABD94087.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6d protein.
Length = 762
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 851 PXPLPXXGXPGSXXXVPPXSPXXGPXXPRTP 943
P LP G PGS VPP S GP P P
Sbjct: 21 PSGLPSNGNPGSSTTVPPAS-KSGPVAPPRP 50
>U49956-5|ABD94086.1| 762|Caenorhabditis elegans Hypothetical
protein M03A1.6c protein.
Length = 762
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 851 PXPLPXXGXPGSXXXVPPXSPXXGPXXPRTP 943
P LP G PGS VPP S GP P P
Sbjct: 21 PSGLPSNGNPGSSTTVPPAS-KSGPVAPPRP 50
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P PPP P PSP P PP PPP
Sbjct: 472 PAPPPPSRIPN---PSPSPQPAEVSKSPPPPPP 501
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 862 PPXGXPRFXXXXPSPLPXPXPXXPPNPP 945
PP P PS +P P P PP PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNPP 945
P PP G P PSP P P PP PP
Sbjct: 223 PSEPPSPG-PVDPSDEPSPSDPPGPPGPPGPP 253
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GGFGG G +G G G + G GGG +G
Sbjct: 302 GGFGGGRGGPMG-GRGGFGGDRGGYGGGGGRG 332
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 883 FXXXXPSPLPXPXPXXPPNPPP 948
F P+P+P P P P PPP
Sbjct: 150 FDQPPPTPIPTPVPILEPPPPP 171
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.4
Identities = 27/99 (27%), Positives = 28/99 (28%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKGXXLQXXXXXXXXXXXXXXXXXXXXXXX 768
G GG G G G G N G GGG +G
Sbjct: 70 GNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNN 129
Query: 767 XGXGGGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGG 651
G GGG GG P G G G GG GG
Sbjct: 130 GGGGGGRGGGGRGGDGR-----GPPGSNGGGDWGGNGGG 163
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 947 GGGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GG GG G G G G G G GGG G
Sbjct: 18 GGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGG 50
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSP-LPXPXPXXPPNP 942
P+ PPP P P P +P P P PP P
Sbjct: 141 PIVPPPV--PEVSEPVPEPPIPAPGPVAPPTP 170
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNP 942
P PPP G P P P P P P P
Sbjct: 633 PPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 850 PLXPPPXGXPRFXXXXPSPLPXPXPXXPPNP 942
P PPP G P P P P P P P
Sbjct: 459 PPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 859 PPPXGXPRFXXXXPSPLPXPXPXXPPNPPP 948
P P P+ PSP+P P P P P P
Sbjct: 20 PMPKSKPK-SEPFPSPMPFPKPMPKPKPKP 48
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 24.2 bits (50), Expect(2) = 9.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 944 GGFGGXXGXGLGXGEGXXXXNLGXPXGGGXKG 849
GG GG G G G G G G GGG G
Sbjct: 355 GGAGGYSGGGGGGGGGAAAGG-GYNAGGGGGG 385
Score = 22.2 bits (45), Expect(2) = 9.5
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = -3
Query: 755 GGXXGGNXRESWXXXVRVSPRGXXGXGFXGGXAGG 651
GG GG + + +P G G+ G GG
Sbjct: 380 GGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGG 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,145,401
Number of Sequences: 27780
Number of extensions: 211504
Number of successful extensions: 2603
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2007
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -