Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C04
         (904 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DA74 Cluster: Chromosome undetermined scaffold_43, wh...    34   5.7  
UniRef50_Q1HMI6 Cluster: Formin A; n=4; Trypanosoma cruzi|Rep: F...    33   7.5  
UniRef50_Q6CDQ5 Cluster: Similarity; n=2; Saccharomycetales|Rep:...    33   7.5  
UniRef50_P42768 Cluster: Wiskott-Aldrich syndrome protein; n=14;...    33   7.5  
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M...    33   7.5  
UniRef50_Q6BSP4 Cluster: Branchpoint-bridging protein; n=2; Sacc...    28   8.2  
UniRef50_Q93424 Cluster: Putative uncharacterized protein grl-23...    33   10.0 

>UniRef50_A0DA74 Cluster: Chromosome undetermined scaffold_43, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_43,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1401

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPPPXXXXK 763
           PPP  GG       PP PPPPP    K
Sbjct: 811 PPPPPGGSKTLPRPPPPPPPPPPPGGK 837


>UniRef50_Q1HMI6 Cluster: Formin A; n=4; Trypanosoma cruzi|Rep:
           Formin A - Trypanosoma cruzi strain CL Brener
          Length = 1178

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
           PPP  G G      PP PPPPP
Sbjct: 653 PPPPPGAGAKSGLSPPPPPPPP 674



 Score = 33.5 bits (73), Expect = 7.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
           PPP  G G      PP PPPPP
Sbjct: 674 PPPPPGAGAKSGLPPPPPPPPP 695


>UniRef50_Q6CDQ5 Cluster: Similarity; n=2; Saccharomycetales|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 664

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
           PPP G G       PPPPPPP
Sbjct: 510 PPPPGPGPAAAGGPPPPPPPP 530


>UniRef50_P42768 Cluster: Wiskott-Aldrich syndrome protein; n=14;
           Mammalia|Rep: Wiskott-Aldrich syndrome protein - Homo
           sapiens (Human)
          Length = 502

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
           PPP  G G      PP PPPPP
Sbjct: 382 PPPPPGAGGPPMPPPPPPPPPP 403



 Score = 33.5 bits (73), Expect = 7.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
           PPP   GG      PP PPPPP
Sbjct: 383 PPPPGAGGPPMPPPPPPPPPPP 404


>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
            Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
            Emericella nidulans (Aspergillus nidulans)
          Length = 1790

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 843  PPPXXGGGXXXXXXPPXPPPPP 778
            PPP  G G      PP PPPPP
Sbjct: 1041 PPPPPGAGAAPPPPPPPPPPPP 1062


>UniRef50_Q6BSP4 Cluster: Branchpoint-bridging protein; n=2;
           Saccharomycetaceae|Rep: Branchpoint-bridging protein -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 518

 Score = 28.3 bits (60), Expect(2) = 8.2
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 841 PPPXGXGXXXXXXXPPPPPP 782
           PPP G         PPPPPP
Sbjct: 411 PPPVGLAPPPSSLAPPPPPP 430



 Score = 23.8 bits (49), Expect(2) = 8.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 799 PPPPPPP 779
           PPPPPPP
Sbjct: 435 PPPPPPP 441


>UniRef50_Q93424 Cluster: Putative uncharacterized protein grl-23;
           n=5; Bilateria|Rep: Putative uncharacterized protein
           grl-23 - Caenorhabditis elegans
          Length = 385

 Score = 33.1 bits (72), Expect = 10.0
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +2

Query: 779 GGGGGXGGXXXXXXPPPXXGGG 844
           GGGGG GG      PPP  GGG
Sbjct: 43  GGGGGCGGGCAPPPPPPACGGG 64



 Score = 33.1 bits (72), Expect = 10.0
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +2

Query: 779 GGGGGXGGXXXXXXPPPXXGGG 844
           GGGGG GG      PPP  GGG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGG 121


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,723,721
Number of Sequences: 1657284
Number of extensions: 9417510
Number of successful extensions: 122286
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70840
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)