Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C04
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011530-1|AAS15666.1|  145|Drosophila melanogaster RE20733p pro...    25   4.0  
AE013599-2439|AAM68499.1|  145|Drosophila melanogaster CG30458-P...    25   4.0  
BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p pro...    25   4.3  
AY118390-1|AAM48419.1|  873|Drosophila melanogaster RE39020p pro...    30   5.0  
AE013599-3085|AAF46639.3|  873|Drosophila melanogaster CG10052-P...    30   5.0  

>BT011530-1|AAS15666.1|  145|Drosophila melanogaster RE20733p
           protein.
          Length = 145

 Score = 24.6 bits (51), Expect(2) = 4.0
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -1

Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
           P P           PPPPPPP
Sbjct: 29  PQPAPPAPVKSYIPPPPPPPP 49



 Score = 24.2 bits (50), Expect(2) = 4.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 799 PPPPPPPXXXXK 764
           PPPPPPP    K
Sbjct: 42  PPPPPPPPPAPK 53


>AE013599-2439|AAM68499.1|  145|Drosophila melanogaster CG30458-PA
           protein.
          Length = 145

 Score = 24.6 bits (51), Expect(2) = 4.0
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -1

Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
           P P           PPPPPPP
Sbjct: 29  PQPAPPAPVKSYIPPPPPPPP 49



 Score = 24.2 bits (50), Expect(2) = 4.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 799 PPPPPPPXXXXK 764
           PPPPPPP    K
Sbjct: 42  PPPPPPPPPAPK 53


>BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p
           protein.
          Length = 1273

 Score = 25.0 bits (52), Expect(2) = 4.3
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPP 781
           PPP           PP PPPP
Sbjct: 699 PPPMPASPTASSAAPPPPPPP 719



 Score = 23.4 bits (48), Expect(2) = 4.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 801 PPXPPPPP 778
           PP PPPPP
Sbjct: 721 PPAPPPPP 728


>AY118390-1|AAM48419.1|  873|Drosophila melanogaster RE39020p
           protein.
          Length = 873

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPP 781
           PPP  G G      PP PPPP
Sbjct: 671 PPPHVGHGGHGQPQPPPPPPP 691


>AE013599-3085|AAF46639.3|  873|Drosophila melanogaster CG10052-PA
           protein.
          Length = 873

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 843 PPPXXGGGXXXXXXPPXPPPP 781
           PPP  G G      PP PPPP
Sbjct: 671 PPPHVGHGGHGQPQPPPPPPP 691


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,031,779
Number of Sequences: 53049
Number of extensions: 577327
Number of successful extensions: 12654
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7938
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)