Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_C04
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.28
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.65
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.65
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.65
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 1.5
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 30 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 7.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 779 GGGGGXGGXXXXXXPPPXXGGG 844
GGGGG GG PPP GGG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGG 64
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 779 GGGGGXGGXXXXXXPPPXXGGG 844
GGGGG GG PPP GGG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGG 121
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PPP GG PP PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
PPP G PPPPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PPP GG P PPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PPP GG PP PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
PPP G PPPPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PPP GG P PPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PPP GG PP PPPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPP 348
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
PPP G PPPPPPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPP 331
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PPP GG P PPPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPP 347
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 779 GGGGGXGGXXXXXXPPPXXGG 841
GGGGG GG PPP GG
Sbjct: 34 GGGGGGGGCCAPPPPPPVCGG 54
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PP G G PP PPPPP
Sbjct: 520 PPSSSGSGSNRRSGPPPPPPPP 541
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
PPP G PPPPPPP
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
PPP G PPPPPPP
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPP 482
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 779 GGGGGXGGXXXXXXPPPXXGGG 844
GGGGG GG PP GGG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 779 GGGGGXGGXXXXXXPPPXXGGG 844
GGGGG GG PP GGG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGG 82
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPPP 778
PPP GG PP PPPP
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPPP 1606
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 843 PPPXXGGGXXXXXXPPXPPPP 781
PPP GGG PP PPPP
Sbjct: 43 PPPPCGGGYEA---PPPPPPP 60
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 841 PPPXGXGXXXXXXXPPPPPPP 779
PPP G G PPPPPPP
Sbjct: 44 PPPCGGGYEA----PPPPPPP 60
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 779 GGGGGXGGXXXXXXPPPXXGG 841
G GGG GG PPP GG
Sbjct: 56 GNGGGFGGNNYNNGPPPFDGG 76
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 779 GGGGGXGGXXXXXXPPPXXGGG 844
G GG GG PPP GGG
Sbjct: 200 GSGGSGGGSGRFPPPPPPYGGG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,511,117
Number of Sequences: 27780
Number of extensions: 240929
Number of successful extensions: 3866
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2186
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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