Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C03
         (901 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...   133   1e-30
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.    133   1e-30
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...   133   1e-30
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...   133   1e-30
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...   133   1e-30
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...   133   1e-30
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...   132   1e-30
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.      118   4e-26
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...   109   1e-23
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    41   0.007

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  133 bits (321), Expect = 1e-30
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF
Sbjct: 20  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79

Query: 308 RRKQH 322
           RRKQH
Sbjct: 80  RRKQH 84


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score =  133 bits (321), Expect = 1e-30
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF
Sbjct: 20  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79

Query: 308 RRKQH 322
           RRKQH
Sbjct: 80  RRKQH 84


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  133 bits (321), Expect = 1e-30
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF
Sbjct: 20  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79

Query: 308 RRKQH 322
           RRKQH
Sbjct: 80  RRKQH 84


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  133 bits (321), Expect = 1e-30
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF
Sbjct: 20  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79

Query: 308 RRKQH 322
           RRKQH
Sbjct: 80  RRKQH 84


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  133 bits (321), Expect = 1e-30
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF
Sbjct: 20  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79

Query: 308 RRKQH 322
           RRKQH
Sbjct: 80  RRKQH 84


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  133 bits (321), Expect = 1e-30
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF
Sbjct: 20  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79

Query: 308 RRKQH 322
           RRKQH
Sbjct: 80  RRKQH 84


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score =  132 bits (320), Expect = 1e-30
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEGCSF
Sbjct: 20  KEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79

Query: 308 RRKQH 322
           RRKQH
Sbjct: 80  RRKQH 84


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score =  118 bits (283), Expect = 4e-26
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEGCSF 307
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLTEG SF
Sbjct: 36  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score =  109 bits (263), Expect = 1e-23
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 292
           K KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+ARLT
Sbjct: 15  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 40.7 bits (91), Expect = 0.007
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +2

Query: 128 KLKRLVPHPNSYFMDVKCPG 187
           K KRLV  PNSYFMDVKCPG
Sbjct: 20  KKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,879,546
Number of Sequences: 237096
Number of extensions: 1523716
Number of successful extensions: 3145
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3045
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)