Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_C01
         (865 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.2  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    24   1.6  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   4.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   4.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.3  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   6.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   6.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   8.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -1

Query: 202 TSLLSSITIFPSGASSTVTSKNTRGRDTFAGISNVSNLQNHHN 74
           TSL ++IT   +  ++T  +       T  G+     LQ HH+
Sbjct: 101 TSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQRHHH 143


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/33 (27%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -1

Query: 142 KNTRGRDTFAGISN--VSNLQNHHNDNRVSRXI 50
           + ++ R   + +SN  +SN+ N++NDN  ++ +
Sbjct: 74  ERSKERKIISSLSNNYISNISNYNNDNNYNKKL 106


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 823 KNATMNILIMHGNKCNNQFATSIAI 749
           KN  + IL  HG +CN+   TSI +
Sbjct: 89  KNPKLGILGTHGRQCND---TSIGV 110


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 823 KNATMNILIMHGNKCNNQFATSIAI 749
           KN  + IL  HG +CN+   TSI +
Sbjct: 90  KNPKLGILGTHGRQCND---TSIGV 111


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 252 GFGYKGSIFHRVIPN 296
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 109 ISNVSNLQNHHNDNR 65
           ISN+SN  N++N N+
Sbjct: 90  ISNISNYNNNNNYNK 104


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 252 GFGYKGSIFHRVIPN 296
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 109 ISNVSNLQNHHNDNR 65
           ISN+SN  N++N N+
Sbjct: 328 ISNISNYNNNNNYNK 342


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 252 GFGYKGSIFHRVIPN 296
           GFGY+ ++ ++V+P+
Sbjct: 15  GFGYESNVKYQVVPS 29


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 580 LEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQ 479
           L V+P++   V +C   S   ++  KT C   +Q
Sbjct: 643 LNVYPEFQENVQLCSEISESYSSNNKTLCKCDAQ 676


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -1

Query: 208 GVTSLLSSITIFPSGASSTVTSKNTRGRDTFAGISNVSNLQNHHNDN 68
           G    LSS +   + ++S   + NT   ++F   +   +L N HN++
Sbjct: 604 GSAENLSSGSNNQTSSASRENTSNTTSMESFKPPTLTESLLNRHNED 650


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,095
Number of Sequences: 438
Number of extensions: 5583
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)