Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_B19
         (867 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p pro...    29   6.3  
AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DN...    29   6.3  
AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB...    29   6.3  
AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA...    29   6.3  

>AY058592-1|AAL13821.1| 1311|Drosophila melanogaster LD28477p
           protein.
          Length = 1311

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 527 SDDESLSGSKIILKTLKEKGENAS 598
           SD+E L GSK++L   K + +NAS
Sbjct: 127 SDEEPLKGSKLVLPARKSRNKNAS 150


>AF217802-1|AAG40586.1| 1311|Drosophila melanogaster xnp/atr-x DNA
           helicase protein.
          Length = 1311

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 527 SDDESLSGSKIILKTLKEKGENAS 598
           SD+E L GSK++L   K + +NAS
Sbjct: 127 SDEEPLKGSKLVLPARKSRNKNAS 150


>AE014297-3805|AAN14055.1| 1311|Drosophila melanogaster CG4548-PB,
           isoform B protein.
          Length = 1311

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 527 SDDESLSGSKIILKTLKEKGENAS 598
           SD+E L GSK++L   K + +NAS
Sbjct: 127 SDEEPLKGSKLVLPARKSRNKNAS 150


>AE014297-3804|AAF56471.1| 1311|Drosophila melanogaster CG4548-PA,
           isoform A protein.
          Length = 1311

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 527 SDDESLSGSKIILKTLKEKGENAS 598
           SD+E L GSK++L   K + +NAS
Sbjct: 127 SDEEPLKGSKLVLPARKSRNKNAS 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,737,172
Number of Sequences: 53049
Number of extensions: 753981
Number of successful extensions: 1356
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)