Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_B17
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    31   0.019
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    24   1.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   4.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.6  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 30.7 bits (66), Expect = 0.019
 Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
 Frame = +2

Query: 209 QPLDIGEHYLVRRSDESWHPA-EIIQSRYSTAESCYEYYVHYVGYDRRLDEWVS---RHR 376
           +P+++ +  +    D   H     I  +   + +C E ++  +GY ++LD WV    + +
Sbjct: 65  RPVEVDDDLIKAIIDSDRHSTTREIAEKLHVSHTCIENHLKQLGYVQKLDTWVPHELKEK 124

Query: 377 VMSDRFDVCE----QSNNNINCDHLLTDKSGRKITRNQKRK 487
            ++ R + C+    ++ N+     L+T      +  N KRK
Sbjct: 125 HLTQRINSCDLLKKRNENDPFLKRLITGDEKWVVYNNIKRK 165


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +2

Query: 641 YPDEYGKQSKLWLCEYCLKYMRMEKTYRYHLS 736
           + D++ +   L++CE+C +  R + +   H S
Sbjct: 25  FQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKS 56


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 273 RLYSRDTVQRNLVTNIMSIMSDMIEDSTNGCPATGLCQI 389
           R+ SRD   R +V     +  ++I  ++ GC A   C +
Sbjct: 116 RVLSRDVQVRAVVAQAYKVDVEVIGGASRGCTAVLRCVV 154


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 273 RLYSRDTVQRNLVTNIMSIMSDMIEDSTNGCPATGLCQI 389
           R+ SRD   R +V     +  ++I  ++ GC A   C +
Sbjct: 116 RVLSRDVQVRAVVAQAYKVDVEVIGGASRGCTAVLRCVV 154


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 245 RSDESWHPAEIIQSRYSTAESCYEYYVHYVGY 340
           +++++W P        + A    EYY HYV +
Sbjct: 438 QTNKTWLPVNENYKSLNLAAQKREYYSHYVAF 469


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 583 IHRQDTNWKI*NRYLVF 633
           ++++D+NW I N +++F
Sbjct: 26  LNQEDSNWIITNSFIIF 42


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 431 RSLCYCSTARIRRTY 387
           R LC C   R+RR Y
Sbjct: 403 RILCACCPGRVRRRY 417


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 704 SYTSNSIHITTILIVYHIHQ 645
           SY+S S+ +  +L ++HI Q
Sbjct: 77  SYSSVSLQVANLLRLFHIPQ 96


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 118 ITFCHNNADNNNGITQIPRKCASSTKS 38
           +++   N  +NN   QIPR    ST S
Sbjct: 723 VSYLTTNNTSNNSQLQIPRASLVSTTS 749


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 704 SYTSNSIHITTILIVYHIHQ 645
           SY+S S+ +  +L ++HI Q
Sbjct: 167 SYSSVSLQVANLLRLFHIPQ 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,326
Number of Sequences: 438
Number of extensions: 5790
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)