Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_B06
         (1077 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6 prot...    38   0.063
M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6 prot...    38   0.063
M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.                   38   0.063
BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.         38   0.063
BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6 pr...    38   0.063
AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6 pr...    38   0.063
J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.                   36   0.34 
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    31   7.2  

>X67309-1|CAA47719.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>M77232-1|AAA60289.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>M20020-1|AAA60288.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>BC094826-1|AAH94826.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>BC071908-1|AAH71908.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>BC071907-1|AAH71907.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>BC027620-1|AAH27620.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>BC013296-1|AAH13296.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>BC009427-1|AAH09427.2|  247|Homo sapiens RPS6 protein protein.
          Length = 247

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 35  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 81


>BC000524-1|AAH00524.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>AL391834-6|CAM21143.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>AL391834-5|CAM21142.1|  218|Homo sapiens ribosomal protein S6
           protein.
          Length = 218

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 6   AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 52


>AB062123-1|BAB93455.1|  249|Homo sapiens ribosomal protein S6
           protein.
          Length = 249

 Score = 37.9 bits (84), Expect = 0.063
 Identities = 21/49 (42%), Positives = 24/49 (48%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN +QGF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKQGFPMKQGVLT-HGRVRLLLSKGHSC 83


>J03537-1|AAA60287.1|  249|Homo sapiens RPS6 protein.
          Length = 249

 Score = 35.5 bits (78), Expect = 0.34
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +3

Query: 240 ARSAXAXEWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           A  A   EW G    + +GGN + GF M QGVLT           GHSC
Sbjct: 37  AADALGEEWKGYVVRI-SGGNDKXGFPMKQGVLT-HGRVRLLLSKGHSC 83


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
            protein.
          Length = 410

 Score = 31.1 bits (67), Expect = 7.2
 Identities = 16/53 (30%), Positives = 18/53 (33%)
 Frame = +3

Query: 918  PPXVSXXPGXDXXPXRPSXLXXPXXTXXPPXXXXPXQRPPTPXVPXPXTXPSG 1076
            PP     P     P  P  L  P  +  PP      Q P  P +P P   P G
Sbjct: 349  PPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMPPVG 401


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,465,789
Number of Sequences: 237096
Number of extensions: 1639766
Number of successful extensions: 3793
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3598
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14760648042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)