Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_B06
         (1077 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07881-1|AAA28871.1|  248|Drosophila melanogaster ribosomal prot...    37   0.042
L02075-1|AAB05985.1|  248|Drosophila melanogaster ribosomal prot...    37   0.042
L02074-4|AAB05982.1|  248|Drosophila melanogaster ribosomal prot...    37   0.042
L01658-1|AAC34306.1|  248|Drosophila melanogaster ribosomal prot...    37   0.042
AY058620-1|AAL13849.1|  217|Drosophila melanogaster LD31286p pro...    37   0.042
AE014298-1080|AAF46288.1|  217|Drosophila melanogaster CG10944-P...    37   0.042
AE014298-1079|AAN09219.1|  251|Drosophila melanogaster CG10944-P...    37   0.042
AE014298-1078|AAN09218.1|  248|Drosophila melanogaster CG10944-P...    37   0.042
L02074-3|AAB05984.1|  200|Drosophila melanogaster protein ( Dros...    34   0.39 
L02074-2|AAB05983.1|  200|Drosophila melanogaster protein ( Dros...    34   0.39 
AE014298-1527|AAF47979.1|  592|Drosophila melanogaster CG2145-PA...    34   0.39 
AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p pro...    30   6.3  
AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA...    30   6.3  

>L07881-1|AAA28871.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 44  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 83


>L02075-1|AAB05985.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 44  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 83


>L02074-4|AAB05982.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 44  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 83


>L01658-1|AAC34306.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 44  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 83


>AY058620-1|AAL13849.1|  217|Drosophila melanogaster LD31286p
           protein.
          Length = 217

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 13  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 52


>AE014298-1080|AAF46288.1|  217|Drosophila melanogaster CG10944-PA,
           isoform A protein.
          Length = 217

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 13  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 52


>AE014298-1079|AAN09219.1|  251|Drosophila melanogaster CG10944-PC,
           isoform C protein.
          Length = 251

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 47  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 86


>AE014298-1078|AAN09218.1|  248|Drosophila melanogaster CG10944-PB,
           isoform B protein.
          Length = 248

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 20/42 (47%), Positives = 22/42 (52%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLTXFSXSHFXCHXGHSC 386
           EW G    + AGGN +QGF M QGVLT           GHSC
Sbjct: 44  EWKGYQLRI-AGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSC 83


>L02074-3|AAB05984.1|  200|Drosophila melanogaster protein (
           Drosophila melanogasterribosomal protein S6 gene and two
           potential alternativelyspliced proteins, complete cds.
           ).
          Length = 200

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLT 341
           EW G    + AGGN +QGF M QGVLT
Sbjct: 44  EWKGYQLRI-AGGNDKQGFPMKQGVLT 69


>L02074-2|AAB05983.1|  200|Drosophila melanogaster protein (
           Drosophila melanogasterribosomal protein S6 gene and two
           potential alternativelyspliced proteins, complete cds.
           ).
          Length = 200

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +3

Query: 261 EWTGLXXDVVAGGNXQQGFXMXQGVLT 341
           EW G    + AGGN +QGF M QGVLT
Sbjct: 44  EWKGYQLRI-AGGNDKQGFPMKQGVLT 69


>AE014298-1527|AAF47979.1|  592|Drosophila melanogaster CG2145-PA
            protein.
          Length = 592

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +2

Query: 896  PXXSXTPPPXGVPXSWXGXXPXP--PLATQXARTHXXXPXGXPAPXASTXSTXTPAXHAX 1069
            P  S TP P G P +W    P P  P+      T    P   P P  S+  T TPA  + 
Sbjct: 240  PPGSPTPTP-GSPSAWQSPLPTPQHPVHPPTKATSAATPTPTPTPSFSSSVTPTPAHGSS 298

Query: 1070 XG 1075
             G
Sbjct: 299  VG 300


>AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p
           protein.
          Length = 1517

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 914 PPPXGVPXSWXGXXPXPPLATQXA 985
           PPP  +P +W    P PP A Q A
Sbjct: 460 PPPGPIPVAWTAAMPLPPDAVQPA 483


>AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA
           protein.
          Length = 1517

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 914 PPPXGVPXSWXGXXPXPPLATQXA 985
           PPP  +P +W    P PP A Q A
Sbjct: 460 PPPGPIPVAWTAAMPLPPDAVQPA 483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,809,650
Number of Sequences: 53049
Number of extensions: 426124
Number of successful extensions: 922
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5555913888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)