Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_B03
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    24   5.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   7.0  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    24   7.0  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   9.3  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   9.3  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = +2

Query: 494 RTKIGRHKKLWKKSSANKRRLRQHVFCNATQNTLLDKMVTKY 619
           RT++    K ++ S  + R ++Q+         L D+++TK+
Sbjct: 97  RTRLREGIKSYRASKQSNRTIKQNSLIKTRARKLYDQVLTKF 138


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 87   TTLSH*FLFSKPKRLWLVQFCIK 155
            +TL   F  ++PK LW+V F ++
Sbjct: 1365 STLKATFTPTEPKNLWIVSFWVR 1387


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 536 SANKRRLRQHVFCNATQ 586
           S N+R L +HV+C  T+
Sbjct: 180 SVNERNLLEHVYCTETR 196


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/49 (22%), Positives = 21/49 (42%)
 Frame = +2

Query: 233 ASPLHNAITLTTKDVRHFSAFKNIEIQPRSLLPQNSLLANKQIMDISMN 379
           A P    +TLT  D+      K++++  RSL    +      +   S++
Sbjct: 72  AMPFQTYVTLTMLDMHTCQTDKSVKLMERSLFSARNCFVESMLASGSLH 120


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/49 (22%), Positives = 21/49 (42%)
 Frame = +2

Query: 233 ASPLHNAITLTTKDVRHFSAFKNIEIQPRSLLPQNSLLANKQIMDISMN 379
           A P    +TLT  D+      K++++  RSL    +      +   S++
Sbjct: 72  AMPFQTYVTLTMLDMHTCQTDKSVKLMERSLFSARNCFVESMLASGSLH 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,693
Number of Sequences: 2352
Number of extensions: 16862
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)