Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_B02
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0078 + 20727684-20728036,20728871-20728895,20729218-207293... 193 1e-49
03_02_0002 + 4853886-4854812 143 2e-34
05_07_0002 - 26979873-26980823 129 3e-30
07_03_0523 + 19030078-19031109 71 9e-13
07_03_0520 + 19014731-19015795 70 3e-12
03_02_0021 - 5049705-5049713,5049744-5049770,5049877-5049940,505... 58 7e-09
05_03_0413 + 13639476-13639537,13639702-13639783,13639865-136399... 38 0.011
05_04_0189 - 18911654-18913207,18913310-18913528,18914034-189143... 30 2.1
03_05_0430 - 24206526-24207710 29 4.9
12_02_0283 + 16784063-16784152,16785084-16785281 29 6.5
10_06_0078 + 10416950-10417174,10417595-10417679,10417782-104179... 29 6.5
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 29 6.5
03_01_0540 - 4055635-4055743,4055829-4055981,4056037-4056104,405... 29 6.5
02_05_0246 + 27136590-27138610,27138933-27139056,27139401-271396... 29 6.5
01_01_0650 - 4948852-4950012 29 6.5
11_06_0610 - 25449085-25453284 28 8.5
11_01_0357 + 2715271-2715509,2716200-2716281,2717117-2717251,271... 28 8.5
03_05_1045 - 29914581-29914829,29914840-29916083,29919055-299191... 28 8.5
01_06_1096 + 34502668-34503036,34504294-34505317,34505388-34505656 28 8.5
01_02_0031 + 10364487-10365407 28 8.5
>09_06_0078 +
20727684-20728036,20728871-20728895,20729218-20729347,
20729441-20729571,20729654-20729742,20730127-20730203,
20730279-20730412
Length = 312
Score = 193 bits (471), Expect = 1e-49
Identities = 101/194 (52%), Positives = 129/194 (66%), Gaps = 2/194 (1%)
Frame = +2
Query: 110 CYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPL 289
C H + D+ AGD +C+ECGLV+ +D SEWRTF+NE S DP RVGGP NPL
Sbjct: 9 CKKHTEVAF--DHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVGGPTNPL 66
Query: 290 LSGGDLSTIIG-PGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKT 466
L+ G LST+I P F S + ++QNR S+ DR+LI AFR I MADR+ L T
Sbjct: 67 LTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRG--SNPDRSLILAFRTIANMADRLGLVAT 124
Query: 467 IVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSK-ISKKEIG 643
I DRAN ++K+V D K+++GR DAI +ACLYIACRQE PRT KEIC+V+ +KKEIG
Sbjct: 125 IKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIG 184
Query: 644 RCFKLILKALETSV 685
R + I+K LE +
Sbjct: 185 RAKEFIVKQLEVEM 198
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIARKAGELDI 801
FCS LG+ N +AA +++ ELDI
Sbjct: 216 FCSTLGMNNQAVKAAQEAVQRSEELDI 242
>03_02_0002 + 4853886-4854812
Length = 308
Score = 143 bits (346), Expect = 2e-34
Identities = 84/196 (42%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Frame = +2
Query: 110 CYA---HPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGV--DPSRVGG 274
CY H ++ D+ GD IC+EC LV+ +R ID SEWRTFS+ SG DP+RVGG
Sbjct: 10 CYCPECHRTTVVVVDHATGDTICTECALVLEERYIDETSEWRTFSDAGSGEDRDPNRVGG 69
Query: 275 PENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRIN 454
+P LS +L T++ P + A + + S D +L AFR I+ MADR+
Sbjct: 70 CSDPFLSHAELGTVVAPAKRQAK--DTASPPHVRVDSKSGQDSSLAVAFRAISDMADRLQ 127
Query: 455 LPKTIVDRANNLFKQVHDGK-NLKGRANDAIASACLYIACRQEGVPRTFKEICAVSK--I 625
L TI DRA LFK++ + K + R DA +ACL+IACR EG PRT KE+ +V +
Sbjct: 128 LVATIRDRAKELFKKMEEAKLCARVRNRDAAYAACLHIACRNEGNPRTLKELASVMRDCQ 187
Query: 626 SKKEIGRCFKLILKAL 673
KKEIGR ++I + L
Sbjct: 188 DKKEIGRMERIIRRHL 203
>05_07_0002 - 26979873-26980823
Length = 316
Score = 129 bits (311), Expect = 3e-30
Identities = 82/192 (42%), Positives = 111/192 (57%), Gaps = 12/192 (6%)
Frame = +2
Query: 134 LIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVD--PSRVGGPENPLLSGGDL 307
++ D+ GD IC+EC LV+ R ID SEWRTF+N+ + D P+RVG +P L
Sbjct: 21 VVLDHTTGDTICTECALVLDARYIDETSEWRTFANDGASDDRDPNRVGDRADPFLPDHVG 80
Query: 308 STIIGPGRGDASFDSFGVSKYQNRRNIS----STDRALINAFREINTMADRINLPKTIVD 475
T I A S + RR + S + AL+ AFR I MADR+ L TI D
Sbjct: 81 GTTIA--YSSAPPKSADAAPLLTRRRVDVVGPSPENALVAAFRGIADMADRLGLVATIRD 138
Query: 476 RANNLFKQVHDG--KNL-KGRANDAIASACLYIACRQEGVPRTFKEICAVS---KISKKE 637
RA +FK++ + K L +GR DA+ +ACL+IACR EG+PRT+KE+ +V+ +KKE
Sbjct: 139 RAKEVFKKLGEAPTKGLPRGRNRDAVYAACLFIACRNEGMPRTYKELASVTAEGAAAKKE 198
Query: 638 IGRCFKLILKAL 673
IGR LI K L
Sbjct: 199 IGRLTTLIKKHL 210
>07_03_0523 + 19030078-19031109
Length = 343
Score = 71.3 bits (167), Expect = 9e-13
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Frame = +2
Query: 134 LIEDYRAGDMICSECGLVVGD--RVIDVGSEWRTF-----SNEKSGVDPSRVGGP----- 277
++ D+ GD IC+ C +G+ WR S+ S VGG
Sbjct: 1 MVLDHATGDAICTGCAFDLGNGANACPEPPRWRAAAGHGDSDGDRSSSSSSVGGDVSPAA 60
Query: 278 ENPLLSGGD-LSTIIGPG------RGDA----SFDSFGVSKYQNRRNISSTDRALINAFR 424
+PLL GG+ ++ +G RG + G + R + T +AL F
Sbjct: 61 ADPLLQGGEGVACSVGAPPVQPRVRGAVVPPKQMRAGGAVPPKVRCGVPDTSKALAEGFD 120
Query: 425 EINTMADRINLPKTIVDRANNLFKQVHDGKNL-KGRANDAIASACLYIACRQEGVPRTFK 601
I MA R+ L + DRA + +++ + + KGR+ DA+ +ACL+ ACR EG PRT K
Sbjct: 121 AIVGMASRLGLADKVSDRAKEVLRKLEEARACPKGRSRDALYAACLHAACRVEGAPRTLK 180
Query: 602 EICAVSK---ISKKEIGRCFKLILKAL 673
E+ A + +K+++G+ I + L
Sbjct: 181 ELIAATSDAAATKRDLGKFINAIKRHL 207
>07_03_0520 + 19014731-19015795
Length = 354
Score = 69.7 bits (163), Expect = 3e-12
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = +2
Query: 377 RRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNL-KGRANDAIASA 553
R + T+++L F I+ MA R+ L + DR ++ ++V + K +GR+ DA+ +A
Sbjct: 125 RGGVPDTNKSLAEGFDAIDNMASRLGLAGNVRDRGKDVLRKVEEAKVCARGRSRDALYAA 184
Query: 554 CLYIACRQEGVPRTFKEICAV---SKISKKEIGRCFKLILKAL 673
CL+ ACR EG PRT KE+ A + +K+ +G+ I + L
Sbjct: 185 CLHTACRMEGAPRTLKELIAATPDAAATKRNLGKFIHAIKRLL 227
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 134 LIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDL 307
++ D+ GD IC+EC +V+G+ + + + G D ++PLL G D+
Sbjct: 20 MVLDHDTGDAICTECAIVLGNGNDPRRPAVASAATKHGGAD---APADDDPLLQGSDV 74
>03_02_0021 -
5049705-5049713,5049744-5049770,5049877-5049940,
5050019-5050806,5050888-5051046,5051778-5052419
Length = 562
Score = 58.4 bits (135), Expect = 7e-09
Identities = 33/98 (33%), Positives = 55/98 (56%)
Frame = +2
Query: 410 INAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVP 589
+ A+ +I +A + L + I D A LFK L+ R+ +A+A+A L A R+ P
Sbjct: 151 LRAYVQIVDVASILRLDRDIADHAFELFKDCSSATCLRNRSVEALATAALVQAIREAQEP 210
Query: 590 RTFKEICAVSKISKKEIGRCFKLILKALETSV*SHYNS 703
RT +EI S + +KEIG+ K++ ++L+ S + NS
Sbjct: 211 RTLQEISTASNLPQKEIGKYIKILGESLKLSQPLNSNS 248
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/43 (30%), Positives = 29/43 (67%)
Frame = +2
Query: 539 AIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILK 667
+I++A +Y+AC+ E +T EIC V+ +++ + + +K +L+
Sbjct: 290 SISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLE 332
>05_03_0413 +
13639476-13639537,13639702-13639783,13639865-13639940,
13640016-13640101,13640294-13640370,13641138-13641194,
13641294-13641378,13642331-13642417,13642603-13642683,
13643748-13643885,13643962-13644147,13644242-13644268
Length = 347
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 383 NISSTDRALINAFREINTMADRINLP--KTIVDRANNLFKQVHDGKNLKGRANDAIASAC 556
N S +R + EI + +++ TI+ A+ + D +GR +A+AC
Sbjct: 63 NSVSHERTINKGREEIRQIVSSLHVAGGDTIISMAHRYYTLAVDKNFTRGRRTTHVAAAC 122
Query: 557 LYIACRQ 577
LYIACRQ
Sbjct: 123 LYIACRQ 129
>05_04_0189 -
18911654-18913207,18913310-18913528,18914034-18914367,
18914425-18914592,18914633-18914724,18914814-18914848,
18915377-18915441,18915565-18915669,18916373-18916434,
18916732-18916860,18918050-18918184,18918336-18918457,
18918808-18918965,18919215-18919372,18919447-18919780,
18919853-18919978,18920213-18920443,18920520-18920692
Length = 1399
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 718 GFCSNLGLPNSVQRAATHIARKAGELDIV 804
G C ++G+PNSV + H+ K D+V
Sbjct: 327 GGCRSMGIPNSVNKTPLHLCIKTWNADVV 355
>03_05_0430 - 24206526-24207710
Length = 394
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -1
Query: 447 LSAIVLISRNALIKALSVLLMFLLF*YLETPKLSNDASPRPGPMIVDKSPP 295
+ I+L+S+ ++ +LL LL L P S SP P P PP
Sbjct: 1 MQLILLLSKPRTLQLFPLLLCLLLLPCLSQPLPSPSPSPSPSPSASPAPPP 51
>12_02_0283 + 16784063-16784152,16785084-16785281
Length = 95
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -1
Query: 351 LSNDASPRPGPMIVDK---SPP--DKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPT 187
+S+ +P PGP +VD+ SPP SG PT D ++ L + ++ +M + T
Sbjct: 33 ISDRDAPTPGPRLVDRSDLSPPKNSSSGDRDTPTFDPRPVGYNNLSISNA-TINMVMIAT 91
Query: 186 TK 181
TK
Sbjct: 92 TK 93
>10_06_0078 +
10416950-10417174,10417595-10417679,10417782-10417900,
10418200-10418287,10419400-10419452,10419876-10420015,
10420094-10420166,10420243-10420311,10420632-10420844,
10422304-10422498,10422581-10422658,10423456-10423590
Length = 490
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -1
Query: 363 ETPKLSNDASPRPGPMIVDKSP---PDKSGFSGPPTRDGSTP 247
+ PKL S PG + V KSP P+ + GP T+ G P
Sbjct: 441 QEPKLQAKFSHVPGGLAVQKSPRFVPNPEKYWGPKTKAGRQP 482
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPP 268
TP + + PRP P++ P SG PP
Sbjct: 134 TPSPPSSSPPRPAPVVAAAEEPRSSGHGKPP 164
>03_01_0540 -
4055635-4055743,4055829-4055981,4056037-4056104,
4056486-4056580,4057180-4057241,4057371-4057410,
4058124-4059141,4059231-4059611,4059873-4059880,
4061005-4061067,4061416-4061719
Length = 766
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -1
Query: 300 PPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTKPHSEHIISP 154
PPD SG P R G+ P + S S T P T+ H I P
Sbjct: 147 PPDPSGCLLCPARPGAAPHLTRCASSASASASGTAHPPTRLHHLMTICP 195
>02_05_0246 +
27136590-27138610,27138933-27139056,27139401-27139694,
27139776-27139978,27140307-27140589
Length = 974
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +2
Query: 266 VGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMAD 445
V P + + DL + + D F ++ +R + S ++NAFRE +A
Sbjct: 668 VAKPGSKYIYLSDLLRFMRQEEAIKTMDLFEGAQEHSRVSKRSLKNWVVNAFRERKALAL 727
Query: 446 RINLPKTIVDRANNLFKQV 502
+N KT V++ N + V
Sbjct: 728 TLNDTKTAVNKLNQMVNVV 746
>01_01_0650 - 4948852-4950012
Length = 386
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 321 PMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTKPHSEH-IISPAL* 145
P V SP +S + G P R + + + S PTS +SP P SE +SP
Sbjct: 187 PRSVASSPLAES-YDGSPLRRQAFESYLTKTIMSSSPTSTLMSPPKSPPSESPPLSPDGA 245
Query: 144 SSIRGAS 124
++IR S
Sbjct: 246 AAIRRGS 252
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = -1
Query: 357 PKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTKP 178
PK S P P +KSPP ++ + PP + S P S P + SP+ P
Sbjct: 771 PKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPP----TPAEESSPPTPEKSPS--P 824
Query: 177 HSEHIISP 154
S H +P
Sbjct: 825 PSGHEGTP 832
>11_01_0357 +
2715271-2715509,2716200-2716281,2717117-2717251,
2717428-2717457,2717486-2717661,2717743-2717894,
2718395-2719083
Length = 500
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 542 IASACLYIACRQEGVPRTFKEICAVSK--ISKKEIGRCFKLILKALE 676
IA+ C+++A + E PR K++ +S I KK+ ++ K+L+
Sbjct: 109 IATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKSLD 155
>03_05_1045 -
29914581-29914829,29914840-29916083,29919055-29919199,
29919727-29919792,29919882-29920108,29920204-29920310,
29920428-29920502,29920600-29920688,29920768-29920848,
29921631-29921702,29922056-29922178
Length = 825
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 182 LVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGG 301
LV GD G EW +E++ S G ENP +GG
Sbjct: 291 LVEGDMAAAGGEEWVAVVDEETEDPSSEQMGEENPWATGG 330
>01_06_1096 + 34502668-34503036,34504294-34505317,34505388-34505656
Length = 553
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 327 PGPMIVDKSPPDKSGF--SGPPTRDGSTPDFSLLKVRHSEPTSM 202
PGP + D +P + F S PP S F L KV ++ TSM
Sbjct: 427 PGPFLNDCAPFSGNSFTESTPPVSAASPDIFQLSKVSPAQSTSM 470
>01_02_0031 + 10364487-10365407
Length = 306
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 327 PGPMIVDKSPPDKSGFSGPPTRDGSTPDF 241
PGP ++D + PD GF P D + P F
Sbjct: 275 PGPDMMDLANPDMPGFGCPWDDDSAGPSF 303
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,763,402
Number of Sequences: 37544
Number of extensions: 520680
Number of successful extensions: 1604
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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